Ll_transcript_364400

• Id Trinity: TRINITY_DN48410_c0_g1_i10
• Name Transcript: Ll_transcript_364400
• Sequence: TTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGCATGCTGAAGACGTTAGAGAGGTACCAGAAATGTAACTATGG AGCACCTGAGGCTAATGTTTCTACAAGGGAAGCTTTGGAGTTGAGTAGTCAACAGGAATACTTGAAGCTGAAGGCACGTTATGAAGCCCTCCAAAGATCC CAAAGGAACCTTATGGGAGAGGATCTTGGTCCTCTGAGCAGCAAAGAGCTCGAGTCACTTGAAAGACAGCTAGATTCTTCATTGAAGCAAATCAGATCAA CAAGGGTAAGAATGTTTCTAATGCTAACCGATAACACCTGAAATTATGAAGGAACATATAATCCTAACACATTTTCAGATAATAACTTTAGTTAACACTG AACAGTAATTATACAACTGAAGCAGAGAAAAATAAGATAATTAGAATTATATCATTTTTATGCAAGGGTTAAATAGTAATGAGGAAAAAAATAATATGCT TGCCAATTGGTTTTCTTATTTTATTAGTTAAAAGAGAAGAGATTCAGGTATATAATTATAGACATACATTTTTCATTCTTATAGTATAATCTCTAACTAA TATTACTGTTAATTTTCCATATCTAAGAAATGCATTGACTAACATCTTCATATATCTAGAGAATCTAGATTATTATATGTTATGCCTTTCTAATCATATG CCATTTTATAGATAATTTTTGGAAATGTGAAGAATTTTATATTTTAATTCTCATCCTTGATACACCTTTTTGTAACTCCAAGAACCCATCATAGTTGTTT GAACTTTAGACTATGTAATGTCTTTATGAATATATCTCTGCAATTTTTCTTTGGCCTTGCATTTTTATCTCCATGATCACTATATATTTTATTTTGTTGT AAAGGATTGGACTCTTCCCCATTGCTATTACCAAATTGTCACAATAGATTATACTTGGCTCCATTTATTGATCTTCAATATTACCATGTATTCTTCTAAT TATATAGTTTGATTTGTCATATTATTGATTGTACAATAATTGCTCGTTTCTTAGATGCTTGAGAGAATACTCTTGAACTGACCTAGTTATTAACGGTGCA GTCTTGCAACCTTGAGTTATTGTTTGTCATATATCATATATCAAACTCTTTTTCCTTGCAAGTATCTTATAATTCTCTTGTCGGCTTCCAAGTGAATTTG ATTTAGGATTTGCATGATCCCTAATAGAAAACTTATATCATACATGATATCTGATAGTATGACAGTGAGTTATAGAAGACTCCAAACTTCTACACAATGA TACATTTTCCTTATAAGACTGATTATCCTTATACAACTTCTCATTATTCATTAGTGGAGTAGCAACATGTATTCATTCAAGCATCTTGAACTTCTTGAAT AGTTCTTCCGAGTACTTTCATCCATGAGACATTGTTTCTTCTTTTCTTTGATTTGCCACAATGTCAACGAAGTAGTGCATTACACCAAGGTCTGACATCA CGATGGTCTTCATAATGTCTTTTTTGAAACTCCGTTATCATTTTCATATTATTTCATGTAGATACGATCATCTACATATAAGGAGATAATAAGAGTTTTG TACTGACCTTGAATCTTAGGGTTAGTTCGAGAGTTAAATTTTGGAGGGGAAAGAAAGAAAATGGAAGGTTCGAGAGTCATCTTAAAAATATATTTCATGG CTCTCAAGCCTTCAATTTCACTTCTTCTCCCTCCAAAAATCAACTCCCAAACAGACCCTTAAGATATACCATAAACTCAATTTCACAAGCCTGAAACTTG TAGTTATTATGGTAAGATCGGGTTATTCTGTCAACATTTCCTTCATCCTAATTCTGAGTAGCACTTTAATCAACTTAAATATCTCGATTAATCTATCTTT GAATATTATAAATCTAACAGCTATTTGGTTATGTGCTATATTCTAAGAAGATATTTTGATAAAAAATTGTGATAAGAATACATGATAGTTAAATAGTTCT TACCAGATTTAAACAAATACATAGAAAAGCTTTAGACTAGATAACAAAATTTTGAGGTTGTTGAAAATTAGTTTAAGTGATGGTTTTTGCAAGGTGTGAG ATAGAACTTAACTCTAACATTTTATCTTTAGATTATTCCATTAACATAATATATTAACATCTTTGATAAATTCTAGATAATATAAATTATTCTATGTTAT GCCTTTGTAATGCTATGCAACTTTGTAGATGATTGTAGAAATATGCAGCATTAGATATTTTAACACAGTTTCCTCTACAGACCCAGTTCATGCTGGATCA GCTATCTGATCTTCAACGCAAGGAACACTTGCTAAGTGAGGCTAACAGATCTTTGAGACAAAGGTTGGAAGGGTATCAAATAAATCAACTCCAAATGAAC CCTAGTGTTGAAGATATGGGATATGGAAGACACCCATGTCACCAAGATCAAGGTGATCACCTCTTTCATCAAATGGAGTGTGAGCCAACATTACAAATTG GATATCAGCATGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGTAATTATATGGCAGGATGGTTACCTTAGTTCAAAGCCCTTATAATAAGATC CACTCAGCACCAAATTTGTGGTTTCAATTTTATTGAGAGGAAAAAACAAAGTTAATATCTTTGGCATGTAATAGACTTATTTTAATTTATATAAATGTCT ACTTTGTATTAGGAACAATATAATTAGTGCTGTTCTATGTGTGCTTTCATAAAACTGCACTTTCTTTGAATCCGTACATCTTTTATTCACTTTATTATAA TAATAGAATAATTATTG
• Tissue: pods
• Gene name: LI_gene_160844;
• Additional information: details;

Expression of Ll_transcript_364400

FPKM

• PAB: 2.2
• PNAB: 2.8
• PS1: 6.5
• PS2: 2.8
• PS3: 5.7
• PW1: 0.4
• PW2: 0.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_364400

• Blastp: Agamous-like MADS-box protein AGL9 homolog from Lycopersicon with 88.29% of identity
• Blastx: Agamous-like MADS-box protein AGL9 homolog from Lycopersicon with 88.29% of identity
• Eggnog: Transcription factor(COG5068)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460426.1)
• Pfam: K-box region (PF01486.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;