| Id Trinity | TRINITY_DN48411_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_362714 |
| Sequence | ATAAATATTACCCTCCTATATATAATCAAATATAAATATAAATATATATAGAGAAGAAAGAGTATATATAATGAAGTAGCTCACCCAAACAACACTTTCA CTCTAACGCTTCTGAGCCTCTCTTTCTCTCTCAACATCGAAGATCATCTTTCAAACCCTAGCGATTGCGAGGTTAACCCAAAATTCCCACTCTCCTTTTC AATTCTCCAGATTTTCATCTTTTTTTAGTATCTATTCGATTTAACTATTCGTTTTTTTATCTGTTTTGATCGAGAGGAATTCGATTTTGGGATTTTTAGG GTTTGATTTCAATTTTCTTTTTTACCCTTCTGATCGGTTTTGTTGTTTAATAAAATCGTTTGTTGTGTTTTTAGTTTTTCATTTAGAGTTTCTGATATTT GCAATTGAAAAAAAAATAGTTTATTTTGGTAAAGAGAATCTTCTGATTATCATGCTATTTTGTTTTTAATTAATTTTGTGTTAAGAGCACATATTTACCT CTCTACTAATTTTAATTATTATCAGTAGTATGCAACAAGTTTGGTTTTGGTTTAAAATTGACTTCACATGCTTTTGTTGCAAAACATTTGATATATATGC TATAATTAGACTTTGTAATAAAATTGTGACAACGCAATTGTTTTTGAACAATGGGGTTTGAATCCTCAGACCCCCCGCGTTTCAATGGTGGTTCATGTTT AAGTTTTTAATGGTTGCTTTATCTATATAGGATCAGTTTATTTGTTACTTGTGAGTTGGATAAGCAGGTTTATATGTGAATTTTGTGTTCATGTCATGAT ATATTTTATAATTGTACATGTAATATAGTACCAACTACCAAAATATCTCTGATTCAAACTTTTTTTCTTTTTTGTATTACTTGCACATTTCTTGAAGCAA GTTGAATGTTTATTTCTTGGAGTGAGTGTGAGGAGTCGGGCTCTTTATTTGTCTTTGGAATTGAGTGTCGTAGTTTGTTTCATAATCGTCATCATTACAA TAACTCTTTTCCTTCATTCTGTTTTGGAAACTGGGGCTGTCATGCTTGTTGCCTTTATACTCACTTTTATGTAGTTTTAAGTACCGGTACGACTAAATTT GTGTGTTAATCTTTGTACAGTTGAGATGGCTTCAAAACGTATTACTAAGGAGTTGAAGGACCTACAGAAAGATCCTCCTGTTTCCTGCAGTGCTGGTCTG TTTTTGCTGGCCTTCTCTTCCCGTCTCACTATCTTTATACTACATACTTACCCCTATTCTTTCAATATCTAACAATGTTGTGTGCATATAAATACCAAAT TTATCTCGAATCGAAATAAATTAATAAAGTCTCTTGGTACTTCTATGGCGTTCTACTTTGTAATGAGTATGGATACTCATATTTTTTTACTCCTTTTTTA TTCTGTTTTTTCTTCTGGCTATTAAGCTATTTGTCATTTTGGATTATAACATGATTACTAGACTTGCCATCAAGTTTAAATTCTCTCAACTGATTTGAAG TGGCTTATTTATGAAGGAGTTCTGTTTTCAGTGGACAAGATACTCAAATAATATGTTGAGTAAATTGAGTTTTGCTTAAATAGAAGATATTATGATAATA AAGAGTTGTTTAATATGGGCTTGGCTTTTACACCATTTTGCATGCATGGTTTGGAAATCTGAGGGGAGAAAAGGATGCTAACAAGGTGACTGGAAATAAC TTTGATGCATACACTATTTTAAAACAGAAAATGTCTGAAGATAGACAAGTTGATTATTGTACATGGATTACAGAGTGAGTGCAAAGGCATTTGTTGATAA TAGAAGACGCTATGTGTATATCTTACGTATTTTCCAACTTTTGATTGCTTATTCATGTAGTAAACTCCAACGGTGAAGTAGGTTATTTGGTTGAGATGAA AATAGGAATCATAAAAAAATATATAATGAAATCTCTTTATGGCAGGAGTATCTTACTCTGACAGTAAGGGAATAAATTTTAATCATTGATTATGCATGTA TGGTCAAGATAAAAACATAAAATAATGCAACGAAGGGTTTCTCCGTTTTGTATTGACAAGCTATCATAATCATTATATTCTACATACATGCAGGCCCTGT TGGTGAAGACATCTTTCATTGGCAAGCTACAATCATGGGTCCAGCAGACAGCCCTTATGCTGGTGGTGTATTCCTAGTGACAATTCACTTCCCACCAGAT TATCCATTTAAGCCACCAAAGGTTGCCTTCAAAACAAAGGTATTCCACCCCAACATCAACAGCAATGGAAGTATCTGTCTTGACATCCTGAAAGAGCAAT GGAGCCCTGCCCTTACAGTTTCCAAGGTTCTGCTGTCAATTTGCTCCCTGCTGACAGACCCAAACCCTGATGACCCTCTAGTTCCAGATATTGCTCACAT GTACAAGACTGACCGAGCCAAGTACGAGAGCACGGCCCGTTCTTGGACTCAGAAATATGCCATGAACTAGTTGACCTATGCTTATGGTTCTGGTGGGCAG TTTATGTGCAAAGAAAGTTGTCGAGAAATATCAGCTAGTATATATTCATATGAATGGTTCTTCCGCTTTGATTTAATAATAATTCCAACTCAGAAATGTT TAGCTTTCATGGTTAATATGGCAAAGTCTTCAGAATGGGTTGCATTTTTATTTGCTTTGAGATTTCAGTTTTTGCCCTCTTTTCTTAATTTTGTAGTTTA ATGAGAAGCAAAATATCAAGGCCAAATTTCAATATTAAGCTTCAGTTTTGCAACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160853; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362714
| Blastp | Ubiquitin-conjugating enzyme E2 5B from Oryza sativa with 95.5% of identity |
|---|---|
| Blastx | Ubiquitin-conjugating enzyme E2 28 from Arabidopsis with 92.86% of identity |
| Eggnog | ubiquitin-conjugating enzyme(COG5078) |
| Kegg | Link to kegg annotations (4328940) |
| CantataDB | Link to cantataDB annotations (CNT0002933) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013466022.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |