| Id Trinity | TRINITY_DN48411_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_362708 |
| Sequence | GAAAGAAGAAGCAGAAAAAAATAAAGGGTGTGAAATGAAATTAAGTTGATTGGATCACGCGCATGGCAAAAAACGCACGAAAGAGTATATAAAAGAAAGT ACCTCACACAAACATGTCTCAGATAAACAAAAACAACTTTCAAACCCTAGCGATTGCGAGTTGAGATGGCTTCAAAACGTATTACTAAGGAGTTGAAGGA CCTACAGAAAGATCCTCCTGTTTCCTGCAGTGCTGGTCTGTTTTTGCTGGCCTTCTCTTCCCGTCTCACTATCTTTATACTACATACTTACCCCTATTCT TTCAATATCTAACAATGTTGTGTGCATATAAATACCAAATTTATCTCGAATCGAAATAAATTAATAAAGTCTCTTGGTACTTCTATGGCGTTCTACTTTG TAATGAGTATGGATACTCATATTTTTTTACTCCTTTTTTATTCTGTTTTTTCTTCTGGCTATTAAGCTATTTGTCATTTTGGATTATAACATGATTACTA GACTTGCCATCAAGTTTAAATTCTCTCAACTGATTTGAAGTGGCTTATTTATGAAGGAGTTCTGTTTTCAGTGGACAAGATACTCAAATAATATGTTGAG TAAATTGAGTTTTGCTTAAATAGAAGATATTATGATAATAAAGAGTTGTTTAATATGGGCTTGGCTTTTACACCATTTTGCATGCATGGTTTGGAAATCT GAGGGGAGAAAAGGATGCTAACAAGGTGACTGGAAATAACTTTGATGCATACACTATTTTAAAACAGAAAATGTCTGAAGATAGACAAGTTGATTATTGT ACATGGATTACAGAGTGAGTGCAAAGGCATTTGTTGATAATAGAAGACGCTATGTGTATATCTTACGTATTTTCCAACTTTTGATTGCTTATTCATGTAG TAAACTCCAACGGTGAAGTAGGTTATTTGGTTGAGATGAAAATAGGAATCATAAAAAAATATATAATGAAATCTCTTTATGGCAGGAGTATCTTACTCTG ACAGTAAGGGAATAAATTTTAATCATTGATTATGCATGTATGGTCAAGATAAAAACATAAAATAATGCAACGAAGGGTTTCTCCGTTTTGTATTGACAAG CTATCATAATCATTATATTCTACATACATGCAGGCCCTGTTGGTGAAGACATCTTTCATTGGCAAGCTACAATCATGGGTCCAGCAGACAGCCCTTATGC TGGTGGTGTATTCCTAGTGACAATTCACTTCCCACCAGATTATCCATTTAAGCCACCAAAGGTAACTAGGCCTAAACTACTTGCTGTTTATGTTATTATA TAAAAGCATATCAGAGATTCAACACCTATTAGTAATTTAGTATGTAGTTGGACTGAAATTTGAAACTTGGACACCTTTGTTGTTTAAATTGATTTTTTTA TAGTTTTTATTTGTCTTCTGAGTTTTGCCAAGCATTCTCTTTTAGTTGGCTTCTTGTGAATGACACTCTGTTCAACCTTTTTCTGTTGTCATGATAATAT CTAGATATGATGTGTCACCAAACTAATATTGAAGCTAGAACCTACATTCATTGACATGGATTCAACTAGATATTTGAATATGTGGGGTGAGGATTAATTC CTATGCATCATTTTTAGTTTTTTTCCCCGACTTGGTGAAGAGTTAATGGTCCTCTATTTGATATTGCCTTTTCGTAATGTGTAGATTATTAATTGAATTC TGTTATATGGATTCACACGGCTTGTTTTTAGTTTTTATGCTCATTGATTTTATTGAATTGACCATTCACTTTTTCTTGAGGCCTTAGCATATATCATGCA CATTCATTTTATCTTGGGTCAAAAGATGTTGATAGTTTACATTTGGAAAAGGACCTTACAGCTTGGTTTTTGTAGGTTGCCTTCAAAACAAAGGTATTCC ACCCCAACATCAACAGCAATGGAAGTATCTGTCTTGACATCCTGAAAGAGCAATGGAGCCCTGCCCTTACAGTTTCCAAGGTTCTGCTGTCAATTTGCTC CCTGCTGACAGACCCAAACCCTGATGACCCTCTAGTTCCAGATATTGCTCACATGTACAAGACTGACCGAGCCAAGTACGAGAGCACGGCCCGTTCTTGG ACTCAGAAATATGCCATGAACTAGTTGACCTATGCTTATGGTTCTGGTGGGCAGTTTATGTGCAAAGAAAGTTGTCGAGAAATATCAGCTAGTATATATT CATATGAATGGTTCTTCCGCTTTGATTTAATAATAATTCCAACTCAGAAATGTTTAGCTTTCATGGTTAATATGGCAAAGTCTTCAGAATGGGTTGCATT TTTATTTGCTTTGAGATTTCAGTTTTTGCCCTCTTTTCTTAATTTTGTAGTTTAATGAGAAGCAAAATATCAAGGCCAAATTTCAATATTAAGCTTCAGT TTTGCAACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160853; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362708
| Blastp | - |
|---|---|
| Blastx | Ubiquitin-conjugating enzyme E2-17 kDa from Lycopersicon with 78.3% of identity |
| Eggnog | ubiquitin-conjugating enzyme(COG5078) |
| Kegg | Link to kegg annotations (100301932) |
| CantataDB | Link to cantataDB annotations (CNT0002933) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462151.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |