Ll_transcript_362709

• Id Trinity: TRINITY_DN48411_c2_g1_i6
• Name Transcript: Ll_transcript_362709
• Sequence: ATAAATATTACCCTCCTATATATAATCAAATATAAATATAAATATATATAGAGAAGAAAGAGTATATATAATGAAGTAGCTCACCCAAACAACACTTTCA CTCTAACGCTTCTGAGCCTCTCTTTCTCTCTCAACATCGAAGATCATCTTTCAAACCCTAGCGATTGCGAGTTGAGATGGCTTCAAAACGAATTACCAAG GAGTTGAAGGACCTACAGAAAGATCCTCCTGTTTCCTGCAGTGCTGGTCTGTTTTTGCTGGCCTTCTCTTCCCGTCTCACTATCTTTATACTACATACTT ACCCCTATTCTTTCAATATCTAACAATGTTGTGTGCATATAAATACCAAATTTATCTCGAATCGAAATAAATTAATAAAGTCTCTTGGTACTTCTATGGC GTTCTACTTTGTAATGAGTATGGATACTCATATTTTTTTACTCCTTTTTTATTCTGTTTTTTCTTCTGGCTATTAAGCTATTTGTCATTTTGGATTATAA CATGATTACTAGACTTGCCATCAAGTTTAAATTCTCTCAACTGATTTGAAGTGGCTTATTTATGAAGGAGTTCTGTTTTCAGTGGACAAGATACTCAAAT AATATGTTGAGTAAATTGAGTTTTGCTTAAATAGAAGATATTATGATAATAAAGAGTTGTTTAATATGGGCTTGGCTTTTACACCATTTTGCATGCATGG TTTGGAAATCTGAGGGGAGAAAAGGATGCTAACAAGGTGACTGGAAATAACTTTGATGCATACACTATTTTAAAACAGAAAATGTCTGAAGATAGACAAG TTGATTATTGTACATGGATTACAGAGTGAGTGCAAAGGCATTTGTTGATAATAGAAGACGCTATGTGTATATCTTACGTATTTTCCAACTTTTGATTGCT TATTCATGTAGTAAACTCCAACGGTGAAGTAGGTTATTTGGTTGAGATGAAAATAGGAATCATAAAAAAATATATAATGAAATCTCTTTATGGCAGGAGT ATCTTACTCTGACAGTAAGGGAATAAATTTTAATCATTGATTATGCATGTATGGTCAAGATAAAAACATAAAATAATGCAACGAAGGGTTTCTCCGTTTT GTATTGACAAGCTATCATAATCATTATATTCTACATACATGCAGGCCCTGTTGGTGAAGACATCTTTCATTGGCAAGCTACAATCATGGGTCCAGCAGAC AGCCCTTATGCTGGTGGTGTATTCCTAGTGACAATTCACTTCCCACCAGATTATCCATTTAAGCCACCAAAGGTAACTAGGCCTAAACTACTTGCTGTTT ATGTTATTATATAAAAGCATATCAGAGATTCAACACCTATTAGTAATTTAGTATGTAGTTGGACTGAAATTTGAAACTTGGACACCTTTGTTGTTTAAAT TGATTTTTTTATAGTTTTTATTTGTCTTCTGAGTTTTGCCAAGCATTCTCTTTTAGTTGGCTTCTTGTGAATGACACTCTGTTCAACCTTTTTCTGTTGT CATGATAATATCTAGATATGATGTGTCACCAAACTAATATTGAAGCTAGAACCTACATTCATTGACATGGATTCAACTAGATATTTGAATATGTGGGGTG AGGATTAATTCCTATGCATCATTTTTAGTTTTTTTCCCCGACTTGGTGAAGAGTTAATGGTCCTCTATTTGATATTGCCTTTTCGTAATGTGTAGATTAT TAATTGAATTCTGTTATATGGATTCACACGGCTTGTTTTTAGTTTTTATGCTCATTGATTTTATTGAATTGACCATTCACTTTTTCTTGAGGCCTTAGCA TATATCATGCACATTCATTTTATCTTGGGTCAAAAGATGTTGATAGTTTACATTTGGAAAAGGACCTTACAGCTTGGTTTTTGTAGGTTGCCTTCAAAAC AAAGGTATTCCACCCCAACATCAACAGCAATGGAAGTATCTGTCTTGACATCCTGAAAGAGCAATGGAGCCCTGCCCTTACAGTTTCCAAGGTTCTGCTG TCAATTTGCTCCCTGCTGACAGACCCAAACCCTGATGACCCTCTAGTTCCAGATATTGCTCACATGTACAAGACTGACCGAGCCAAGTACGAGAGCACGG CCCGTTCTTGGACTCAGAAATATGCCATGAACTAGTTGACCTATGCTTATGGTTCTGGTGGGCAGTTTATGTGCAAAGAAAGTTGTCGAGAAATATCAGC TAGTATATATTCATATGAATGGTTCTTCCGCTTTGATTTAATAATAATTCCAACTCAGAAATGTTTAGCTTTCATGGTTAATATGGCAAAGTCTTCAGAA TGGGTTGCATTTTTATTTGCTTTGAGATTTCAGTTTTTGCCCTCTTTTCTTAATTTTGTAGTTTAATGAGAAGCAAAATATCAAGGCCAAATTTCAATAT TAAGCTTCAGTTTTGCAACG
• Tissue: pods
• Gene name: LI_gene_160853;
• Additional information: -

Expression of Ll_transcript_362709

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.5
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362709

• Blastp: -
• Blastx: Ubiquitin-conjugating enzyme E2-17 kDa from Lycopersicon with 78.3% of identity
• Eggnog: ubiquitin-conjugating enzyme(COG5078)
• Kegg: Link to kegg annotations (100301932)
• CantataDB: Link to cantataDB annotations (CNT0002933)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462151.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;