Ll_transcript_362679

• Id Trinity: TRINITY_DN48422_c3_g1_i17
• Name Transcript: Ll_transcript_362679
• Sequence: CACAACACTAAAAAACAATGAAAATCATGCACTCTTCTCTGTCATAGCATCATCTAACATAACATAACGACAATCTTAATTAACAAAAAAGAACATAGCA ACTACATATGATTGATACATGCCACCTTAGTTGTTTGCATAGGATAACTATGGTTATTTGCAGGTTCAGATCTTTGCTTTCTCTTTCCAAAACCAATCCT TTCTTCCTTTCTTCTTCATCATTCTCAATCCGCACCTTCTCTTCTTCCCACCTTCCTCAGCACTTGCAGAATGTTGGATTCATTGGACTTGGAAATATGG GATCTCGGATGGCAATTAATTTGGTTAAGGCTGGGTACAAACTCACAGTTTATGACATAAACTCTGATGTTCTTAAGAAGTTCTCTCAGATGGGAGTTTC CACAAAGAAAACACCTTATGAAGTTTCAGAAGCAAGCGATGTTATAATTACAATGTTACCTTCCTCTGCCCATGTAATTGATGTTTACACTGGACCAAAT GGTTTGCTTCATGATGGAAAACTCTTAAGGCCATGGTTATTGATAGATTCATCCACCATTGATCCACAAACATCCAAAAACCTTTCTGCTACAATATCTA ATTATACTCTGAAAGAAAAGAAAGGTGATCAGGAAACACCTGCCAAGTTGGAAGCTCCTGTATCCGGAAGCGTGATTGCGGCGGAAGCTGGGACACTTAC TTTTATGGTTGGTGGCTCTGAGGAAGCATTTCTAGCTGCAAAATCAGTATTCTTTTCAATGGGTAAAAGTGCAATATATTGTGGAGGAGCAGGAAGTGGT TCAGCTGCAAAAATCTGCAATAATTTGGCAATGGCTGTGAGCATGTTAGGAGTATCAGAAGCCCTTGCTCTAGGCCAATCTCTTGGAGTTTCTGCCACCA CTTTGACAAAAATATTTAACTGTTCTAGTGCTCGCTGTTGGAGCAGTGATGCTTACAACCCAGTTCCTGGAGTGATGGAAGGGGTTCCCTCTTCAAGAGA TTACAATGGAGGGTTTTCATCCAAGCTTATGGTTAAAGACTTGAACCTAGCAGTAGAATCAGCCAAGCATGCTGAATGTAAATACCCACTAACATCCCAA GCTCAAAAGATATATAGTGAGCTCTGCAGTGGTGGTCATGAAGGTAGAGACTTCTCATGTGCTTTTCGTCATTATTACTCTGGAATGGACCAAAATCAAG ACCACTAAATTTACCTTCTGCATAAACATACATCTACTGTAATAAACTGTTACATATATATATATATATATATATATATATATATAACATATGTTCAGTT CTATAACACTGTCCTAGCATCATGAGATTACTGCATAGGACAAACTTGTACTTCATTCATCTTAGTACTTGGCTACTTTGCAAACAAATAATTCATGGCA CATTCAACTTTTAGACAACCACATATGGTCATAACCCATCATGCAGCAGCCATGAACATGCTTTTTGCATATGCCCCATTTTTACACCCCAAAAAAATGG TTAATACAAACGTGTGAAAGAACCAACCTTTCAACATATATGGGATACCAATGAGAGATTAATTCCCACAATGTGTTAAAACTCAAACATTTAGAGCATG GGCAGTGCAGCTATATAGAAGAAAGATCTTCATATATAGTCTTGATTCCCGGCCTTTCGGAAACTGATCTAATGCATTGAATGGCTATACCTAGAACCTC CATTCCCTTTTCTACAGCAGTGTTACTAATTTCTGACATCAATGTAGCATCAAAACATTCTGAGCCTCGACCTTCTGCTACCCGCAACCTTATCCAATCT GTCAGATCAACACTTCCCGCGTCTCCAAATATCACATCACCAGCACACCTTCCAGAGAAAAGTTCCAAAAGTATCACTCCAAAAGCATAAACATCTGATT TTAAGGAGGGTATTGGTTTCTTGGAAGCAGCTAATTCTGGTGCACGATAGCCCAAAACCCCGGCATCAAGAATCTGTTCAACGGTACCAGCCTGAGTCAT AAGTCGGTGAAGGCAGTAATCAGAAACACGCGCATTCATATCAGCTGTATCTAGCAACACATTTGTAGCTTTGAGGTTCCCGTGAGGAACAGTGCGGTCA AAATGGAGATAGTTCAGGCCACGTGCCACATCAACTGCTATTTTGAGCCTCTGTGCCCATGTTAATGGTGGACCTATTCTTCCTGGCCGATCTGAGAATT AAAATTTGTAAGTTCAAATGTGGACAAATGATAAACAACACCAATAAATATGATGGAAGATAATTCAGAAACATTTATTAGCTGTACCAGGAAAATATGA TATGCATATAATCTACCTGTGCTTG
• Tissue: pods
• Gene name: LI_gene_160956;
• Additional information: details;

Expression of Ll_transcript_362679

FPKM

• PAB: 39.2
• PNAB: 6
• PS1: 3
• PS2: 5.2
• PS3: 8.9
• PW1: 4.7
• PW2: 8.8
• PW3: 7.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362679

• Blastp: Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 65.23% of identity
• Blastx: Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 68.4% of identity
• Eggnog: Dehydrogenase(COG2084)
• Kegg: Link to kegg annotations (AT4G20930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425632.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;