Ll_transcript_362660

• Id Trinity: TRINITY_DN48422_c3_g1_i3
• Name Transcript: Ll_transcript_362660
• Sequence: CACAACACTAAAAAACAATGAAAATCATGCACTCTTCTCTGTCATAGCATCATCTAACATAACATAACGACAATCTTAATTAACAAAAAAGAACATAGCA ACTACATATGATTGATACATGCCACCTTAGTTGTTTGCATAGGATAACTATGGTTATTTGCAGGTTCAGATCTTTGCTTTCTCTTTCCAAAACCAATCCT TTCTTCCTTTCTTCTTCATCATTCTCAATCCGCACCTTCTCTTCTTCCCACCTTCCTCAGCACTTGCAGAATGTTGGATTCATTGGACTTGGAAATATGG GATCTCGGATGGCAATTAATTTGGTTAAGGCTGGGTACAAACTCACAGTTTATGACATAAACTCTGATGTTCTTAAGAAGTTCTCTCAGATGGGAGTTTC CACAAAGAAAACACCTTATGAAGTTTCAGAAGCAAGCGATGTTATAATTACAATGTTACCTTCCTCTGCCCATATCGGGTCTGGCAGACCCACTAAGTGG GAATCTCGCTTACTAGTCAAGTTTCATATCAAACTATTGCTGTGGAGAATGATTATATCCTTTCTGATATTAAGTTTACATATATGTGGTGCCATCTTGA AAGCAGGTTGATTCCTGATAGCGATACTTGTTGGTAAGGCAGCCGCACATCCTGTAAGGGCTTAGTTCCTTACCCGTAGGATTAGAGGATACCAATGTTA TAACAAAATCTTCAAAGCAGGCCCTAATCTGTGAACAATTACTTTTCTGGACAGTGATCTGTAGTTTACTAAGTTGTGTACCTAAATGACTAAATATCTC ATTTACCACATTACTGGTTTGGATGAATTGTCTTACTGCTCCAAAGATTATTGTTTGCCTTTGTACTGATGCAAGAATAACATCCTTATTTAAGTAGGTA ATTGATGTTTACACTGGACCAAATGGTTTGCTTCATGATGGAAAACTCTTAAGGCCATGGTTATTGATAGATTCATCCACCATTGATCCACAAACATCCA AAAACCTTTCTGCTACAATATCTAATTATACTCTGAAAGAAAAGAAAGGTGATCAGGAAACACCTGCCAAGTTGGAAGCTCCTGTATCCGGAAGCGTGAT TGCGGCGGAAGCTGGGACACTTACTTTTATGGTTGGTGGCTCTGAGGAAGCATTTCTAGCTGCAAAATCAGTATTCTTTTCAATGGGTAAAAGTGCAATA TATTGTGGAGGAGCAGGAAGTGGTTCAGCTGCAAAAATCTGCAATAATTTGGCAATGGCTGTGAGCATGTTAGGAGTATCAGAAGCCCTTGCTCTAGGCC AATCTCTTGGAGTTTCTGCCACCACTTTGACAAAAATATTTAACTGTTCTAGTGCTCGCTGTTGGAGCAGTGATGCTTACAACCCAGTTCCTGGAGTGAT GGAAGGGGTTCCCTCTTCAAGAGATTACAATGGAGGGTTTTCATCCAAGCTTATGGTTAAAGACTTGAACCTAGCAGTAGAATCAGCCAAGCATGCTGAA TGTAAATACCCACTAACATCCCAAGCTCAAAAGATATATAGTGAGCTCTGCAGTGGTGGTCATGAAGGTAGAGACTTCTCATGTGCTTTTCGTCATTATT ACTCTGGAATGGACCAAAATCAAGACCACTAAATTTACCTTCTGCATAAACATACATCTACTGTAATAAACTGTTACATATATATATATATATATATATA TATATATAACATATGTTCAGTTCTATAACACTGTCCTAGCATCATGAGATTACTGCATAGGACAAACTTGTACTTCATTCATCTTAGTACTTGGCTACTT TGCAAACAAATAATTCATGGCACATTCAACTTTTAGACAACCACATATGGTCATAACCCATCATGCAGCAGCCATGAACATGCTTTTTGCATATGCCCCA TTTTTACACCCCAAAAAAATGGTTAATACAAACGTGTGAAAGAACCAACCTTTCAACATATATGGGATACCAATGAGAGATTAATTCCCACAATGTGTTA AAACTCAAACATTTAGAGCATGGGCAGTGCAGCTATATAGAAGAAAGATCTTCATATATAGTCTTGATTCCCGGCCTTTCGGAAACTGATCTAATGCATT GAATGGCTATACCTAGAACCTCCATTCCCTTTTCTACAGCAGTGTTACTAATTTCTGACATCAATGTAGCATCAAAACATTCTGAGCCTCGACCTTCTGC TACCCGCAACCTTATCCAATCTGTCAGATCAACACTTCCCGCGTCTCCAAATATCACATCACCAGCACACCTTCCAGAGAAAAGTTCCAAAAGTATCACT CCAAAAGCATAAACATCTGATTTTAAGGAGGGTATTGGTTTCTTGGAAGCAGCTAATTCTGGTGCACGATAGCCCAAAACCCCGGCATCAAGAATCTGTT CAACGGTACCAGCCTGAGTCATAAGTCGGTGAAGGCAGTAATCAGAAACACGCGCATTCATATCAGCTGTATCTAGCAACACATTTGTAGCTTTGAGGTT CCCGTGAGGAACAGTGCGGTCAAAATGGAGATAGTTCAGGCCACGTGCCACATCAACTGCTATTTTGAGCCTCTGTGCCCATGTTAATGGTGGACCTATT CTTCCTGGCCGATCTGAGAATTAAAATTTGTAAGTTCAAATGTGGACAAATGATAAACAACACCAATAAATATGATGGAAGATAATTCAGAAACATTTAT TAGCTGTACCAGGAAAATATGATATGCATATAATCTACCTGTGCTTG
• Tissue: pods
• Gene name: LI_gene_160956;
• Additional information: details;

Expression of Ll_transcript_362660

FPKM

• PAB: 0.5
• PNAB: 0
• PS1: 0.2
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362660

• Blastp: Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 71.17% of identity
• Blastx: Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 68.33% of identity
• Eggnog: Dehydrogenase(COG2084)
• Kegg: Link to kegg annotations (AT4G20930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425632.1)
• Pfam: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (PF14833.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;