Ll_transcript_362666

• Id Trinity: TRINITY_DN48422_c3_g1_i7
• Name Transcript: Ll_transcript_362666
• Sequence: CACAACACTAAAAAACAATGAAAATCATGCACTCTTCTCTGTCATAGCATCATCTAACATAACATAACGACAATCTTAATTAACAAAAAAGAACATAGCA ACTACATATGATTGATACATGCCACCTTAGTTGTTTGCATAGGATAACTATGGTTATTTGCAGGTTCAGATCTTTGCTTTCTCTTTCCAAAACCAATCCT TTCTTCCTTTCTTCTTCATCATTCTCAATCCGCACCTTCTCTTCTTCCCACCTTCCTCAGCACTTGCAGAATGTTGGATTCATTGGACTTGGAAATATGG GATCTCGGATGGCAATTAATTTGGTTAAGGCTGGGTACAAACTCACAGTTTATGACATAAACTCTGATGTTCTTAAGAAGTTCTCTCAGATGGGAGTTTC CACAAAGAAAACACCTTATGAAGTTTCAGAAGCAAGCGATGTTATAATTACAATGTTACCTTCCTCTGCCCATGTGAGTATGGTCATTCCAATGTCATTT CCTTTCGTGTGAATATATTACATCACCTTTGTCTCCTGGAAATAGTCTCTCTGCTTATGGAGTTAAAACTGTGTACATCTACTTTCCTCAGATCGGGTCT GGCAGACCCACTAAGTGGGAATCTCGCTTACTAGTCAAGTTTCATATCAAACTATTGCTGTGGAGAATGATTATATCCTTTCTGATATTAAGTTTACATA TATGTGGTGCCATCTTGAAAGCAGGTTGATTCCTGATAGCGATACTTGTTGGTAAGGCAGCCGCACATCCTGTAAGGGCTTAGTTCCTTACCCGTAGGAT TAGAGGATACCAATGTTATAACAAAATCTTCAAAGCAGGCCCTAATCTGTGAACAATTACTTTTCTGGACAGTGATCTGTAGTTTACTAAGTTGTGTACC TAAATGACTAAATATCTCATTTACCACATTACTGGTTTGGATGAATTGTCTTACTGCTCCAAAGATTATTGTTTGCCTTTGTACTGATGCAAGAATAACA TCCTTATTTAAGTAGGTAATTGATGTTTACACTGGACCAAATGGTTTGCTTCATGATGGAAAACTCTTAAGGCCATGGTTATTGATAGATTCATCCACCA TTGATCCACAAACATCCAAAAACCTTTCTGCTACAATATCTAATTATACTCTGAAAGAAAAGAAAGGTGATCAGGAAACACCTGCCAAGTTGGAAGCTCC TGTATCCGGAAGCGTGATTGCGGCGGAAGCTGGGACACTTACTTTTATGGTTGGTGGCTCTGAGGAAGCATTTCTAGCTGCAAAATCAGTATTCTTTTCA ATGGGTAAAAGTGCAATATATTGTGGAGGAGCAGGAAGTGGTTCAGCTGCAAAAATCTGCAATAATTTGGCAATGGCTGTGAGCATGTTAGGAGTATCAG AAGCCCTTGCTCTAGGCCAATCTCTTGGAGTTTCTGCCACCACTTTGACAAAAATATTTAACTGTTCTAGTGCTCGCTGTTGGAGCAGTGATGCTTACAA CCCAGTTCCTGGAGTGATGGAAGGGGTTCCCTCTTCAAGAGATTACAATGGAGGGTTTTCATCCAAGCTTATGGTTAAAGACTTGAACCTAGCAGTAGAA TCAGCCAAGCATGCTGAATGTAAATACCCACTAACATCCCAAGCTCAAAAGATATATAGTGAGCTCTGCAGTGGTGGTCATGAAGGTAGAGACTTCTCAT GTGCTTTTCGTCATTATTACTCTGGAATGGACCAAAATCAAGACCACTAAATTTACCTTCTGCATAAACATACATCTACTGTAATAAACTGTTACATATA TATATATATATATATATATATATATATAACATATGTTCAGTTCTATAACACTGTCCTAGCATCATGAGATTACTGCATAGGACAAACTTGTACTTCATTC ATCTTAGTACTTGGCTACTTTGCAAACAAATAATTCATGGCACATTCAACTTTTAGACAACCACATATGGTCATAACCCATCATGCAGCAGCCATGAACA TGCTTTTTGCATATGCCCCATTTTTACACCCCAAAAAAATGGTTAATACAAACGTGTGAAAGAACCAACCTTTCAACATATATGGGATACCAATGAGAGA TTAATTCCCACAATGTGTTAAAACTCAAACATTTAGAGCATGGGCAGTGCAGCTATATAGAAGAAAGATCTTCATATATAGTCTTGATTCCCGGCCTTTC GGAAACTGATCTAATGCATTGAATGGCTATACCTAGAACCTCCATTCCCTTTTCTACAGCAGTGTTACTAATTTCTGACATCAATGTAGCATCAAAACAT TCTGAGCCTCGACCTTCTGCTACCCGCAACCTTATCCAATCTGTCAGATCAACACTTCCCGCGTCTCCAAATATCACATCACCAGCACACCTTCCAGAGA AAAGTTCCAAAAGTATCACTCCAAAAGCATAAACATCTGATTTTAAGGAGGGTATTGGTTTCTTGGAAGCAGCTAATTCTGGTGCACGATAGCCCAAAAC CCCGGCATCAAGAATCTGTTCAACGGTACCAGCCTGAGTCATAAGTCGGTGAAGGCAGTAATCAGAAACACGCGCATTCATATCAGCTGTATCTAGCAAC ACATTTGTAGCTTTGAGGTTCCCGTGAGGAACAGTGCGGTCAAAATGGAGATAGTTCAGGCCACGTGCCACATCAACTGCTATTTTGAGCCTCTGTGCCC ATGTTAATGGTGGACCTATTCTTCCTGGCCGATCTGAGAATTAAAATTTGTAAGTTCAAATGTGGACAAATGATAAACAACACCAATAAATATGATGGAA GATAATTCAGAAACATTTATTAGCTGTACCAGGAAAATATGATATGCATATAATCTACCTGTGCTTG
• Tissue: pods
• Gene name: LI_gene_160956;
• Additional information: details;

Expression of Ll_transcript_362666

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 1.7
• PW1: 0
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362666

• Blastp: Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 71.17% of identity
• Blastx: Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 68.33% of identity
• Eggnog: Dehydrogenase(COG2084)
• Kegg: Link to kegg annotations (AT4G20930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425632.1)
• Pfam: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (PF14833.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;