| Id Trinity | TRINITY_DN48422_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_362668 |
| Sequence | GTTTTAAAGGCTTGCATTTGATCCTAGAAACTAGAAGAACACTAGATAACTAGTTTTTCTAATTCTAATTGGGAATGATAACTTTTTAGTGTAAACTATA GTTTTGGTTCTTTGAAAGATTTTTTGAACATTAAACTGCTCTTTGGATGATTAGTGACATCAAATTTGGTCCTTAAATGACAATGTTGGTCATAGGAAAC ATAACTTTTGGACTATTTTGATGACAAATTTATAATTTGAATACCAAATTTGATGTAATAATCTTTCAAGAACCAAAATAGGGCTGTACTCTAACTTTTA GTATATTGTTTCTCAGTTTGATAGTAAATTTGATAACAATCGTCAATCTGCATAACTTTATTTACAATGCATGAATAGTATGATCAGTTCATTCACCAAA GTTGTAATGTTATCGGCCACGCAAGGAAATGTTGCAGCGAAGTTCCGGGTTTTGTGACAAAATTAGACTAATGAACAATATATGAAACTCCCAGGTTGGT GGCTCTGAGGAAGCATTTCTAGCTGCAAAATCAGTATTCTTTTCAATGGGTAAAAGTGCAATATATTGTGGAGGAGCAGGAAGTGGTTCAGCTGCAAAAA TCTGCAATAATTTGGCAATGGCTGTGAGCATGTTAGGAGTATCAGAAGCCCTTGCTCTAGGCCAATCTCTTGGAGTTTCTGCCACCACTTTGACAAAAAT ATTTAACTGTTCTAGTGCTCGCTGTTGGAGCAGTGATGCTTACAACCCAGTTCCTGGAGTGATGGAAGGGGTTCCCTCTTCAAGAGATTACAATGGAGGG TTTTCATCCAAGCTTATGGTTAAAGACTTGAACCTAGCAGTAGAATCAGCCAAGCATGCTGAATGTAAATACCCACTAACATCCCAAGCTCAAAAGATAT ATAGTGAGCTCTGCAGTGGTGGTCATGAAGGTAGAGACTTCTCATGTGCTTTTCGTCATTATTACTCTGGAATGGACCAAAATCAAGACCACTAAATTTA CCTTCTGCATAAACATACATCTACTGTAATAAACTGTTACATATATATATATATATATATATATATATATATAACATATGTTCAGTTCTATAACACTGTC CTAGCATCATGAGATTACTGCATAGGACAAACTTGTACTTCATTCATCTTAGTACTTGGCTACTTTGCAAACAAATAATTCATGGCACATTCAACTTTTA GACAACCACATATGGTCATAACCCATCATGCAGCAGCCATGAACATGCTTTTTGCATATGCCCCATTTTTACACCCCAAAAAAATGGTTAATACAAACGT GTGAAAGAACCAACCTTTCAACATATATGGGATACCAATGAGAGATTAATTCCCACAATGTGTTAAAACTCAAACATTTAGAGCATGGGCAGTGCAGCTA TATAGAAGAAAGATCTTCATATATAGTCTTGATTCCCGGCCTTTCGGAAACTGATCTAATGCATTGAATGGCTATACCTAGAACCTCCATTCCCTTTTCT ACAGCAGTGTTACTAATTTCTGACATCAATGTAGCATCAAAACATTCTGAGCCTCGACCTTCTGCTACCCGCAACCTTATCCAATCTGTCAGATCAACAC TTCCCGCGTCTCCAAATATCACATCACCAGCACACCTTCCAGAGAAAAGTTCCAAAAGTATCACTCCAAAAGCATAAACATCTGATTTTAAGGAGGGTAT TGGTTTCTTGGAAGCAGCTAATTCTGGTGCACGATAGCCCAAAACCCCGGCATCAAGAATCTGTTCAACGGTACCAGCCTGAGTCATAAGTCGGTGAAGG CAGTAATCAGAAACACGCGCATTCATATCAGCTGTATCTAGCAACACATTTGTAGCTTTGAGGTTCCCGTGAGGAACAGTGCGGTCAAAATGGAGATAGT TCAGGCCACGTGCCACATCAACTGCTATTTTGAGCCTCTGTGCCCATGTTAATGGTGGACCTATTCTTCCTGGCCGATCTGAGAATTAAAATTTGTAAGT TCAAATGTGGACAAATGATAAACAACACCAATAAATATGATGGAAGATAATTCAGAAACATTTATTAGCTGTACCAGGAAAATATGATATGCATATAATC TACCTGTGCTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160956; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362668
| Blastp | Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 73.1% of identity |
|---|---|
| Blastx | Probable LRR receptor-like serine/threonine-protein kinase At4g20940 from Arabidopsis with 81.54% of identity |
| Eggnog | Dehydrogenase(COG2084) |
| Kegg | Link to kegg annotations (AT4G20930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425626.1) |
| Pfam | NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (PF14833.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |