| Id Trinity | TRINITY_DN48423_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_362921 |
| Sequence | AATGTGATAATTTTTTGTCATCATTTGTAACCCAAATATACTATCTTTATAACCTTTTTGGTACTGTAGGGCCTCAAAATCCCTTTATATATCCAACTAT GTAGCCATACATTTTCATAAACACCAACTAACTTATAATCTCATACCCTACCCTGCATTTTAGCAGAGTCACTACAATGCCATCATCACTATTTTCTTTC CTCTATATGGCTCCTCTCTTTTCTCTTCTTTCACTCTCATCAATTATTCCTTCTAGTGCTCAAGGTCCACCTTCACCTGGATACTATCTTACTTCTAAAA TTAATACTGTTAACTTTGATCAAGGGTTTAGAAACCTATGGGGACCTCAGCATCAAAGACTTGACCAAGGCTCATTGACAATATGGCTTGACTCTACTTC AGGTATGTGAATTCGTCTCATCAGAATAAAGTATATACTTATATCAAGATATAAGTTATCTCCTTCAACCACTCAATTTTAATACCATGAAATACTTTAT TCTTTTTGTGTTATATGTAGCTAGCTATCAATTTCACTTAAATTAAACCACCTAAATTTCATTTCTTTTTCCTTATGGAAAGTTTATTCTTTGTTATGCA ATAACTCGTATTCTCTATATAAGAATAATATAAGTTATGAGCTTGGGCGGCTGATGTAAAAGGGCTGGGGTAGAGGACTATATATAATTTATGTCGTGTA AACCTAATGTAACACTGAGGACAATAACTAAACACAAGTCATTATTCTTAATACATTGTGGTAGTCTCTCAAGGCTCCAGATGACGTAAACACAATTGAT ATAACCTCGTTACCAAACTCCTTGTGTTACTCTCTTATCTCTATTCTCTTTTACTATTTGATTGTTCGTTTGTACCACAACAATTGCTCTTCGTGATTAC TAAATAATACCTTAGTGCATACTCTTACTATGATTAATTTTAAAACATAGGGAGTGGATTCAAGTCACTTCACTCATATCGATCTGGATACTTTGGTGCT GCAATTAAGCTTCAACCTGGATATACTGCAGGAGTCATAACATCCATCTATCTTTCAAATAACCAAGACCACCCAGGGAACCATGATGAAATTGACATTG AATTCCTTGGTACAACACCAGGTAAGCCATATGTGTTGCAGACAAATGTATACATCAGAGGAAGTGGAGATGGGTATATTATAGGAAGAGAGATGAAGTT TCATCTTTGGTTCGATCCTACACAAGATTTTCACAACTATGCTATTCTATGGAAACCCAGTGAGATAATATTTTTTGTGGATGATGTGCCCATAAGGAGG TATCCTAGGAAGAGTGATGCTACATACCCTACAAGGCCAATGTATGTCTATGGATCAGTGTGGGATGCATCTTCATGGGCAACAGAGAATGGAAAATACA AAGCTGATTATAGATACCAACCCTTCATTGGTAGGTACAGAAACTTCAGATTGCAAGGTTGCACCATTCAAAGCCCTAACTATTGCAAGCCACCCTCTAC CTCACCCTCTGGCTATGGCAGCCTAAGCCCTCAGCAGTTTGCAGCCATGCAATGGGCCCAAAACAACTACTTGATCTACAATTATTGTCATGACCCTAGA AGAGATCACACACTTATCCCAGAGTGCTAGCCGAAGAAGTTATTTGCATGGTCTTAAGTCAATTGTCTCCAACATATTCAAATTGTTGATGTTGATAAAA ATCATATTTTTAAGTACTATATGATTAACTTTTTGGATGTGTCTGAGACAGTTGGTTCAAGTTGGTGTGTTATGTTACCTTTATTTTGAAAATATTAGTA ATCATATAGTTTATTTATGGGGTGGTTTTTGAGACGGTTAATGCTGAAGTGTAATTGCAAGAGCAGTTGAACGTCCAAGCCCTCCAATGATTGGAATGTT TTTGTTGTTTTTTGGTGTGTTGTATTATTACTTGATAAGTACTTTGTTGTAATCTTTTTTGAAATCAATTTGATTTGGTTGCTTTCTAAAAAAAAAAAAA AA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160964; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362921
| Blastp | Xyloglucan endotransglucosylase/hydrolase protein 31 from Arabidopsis with 68.28% of identity |
|---|---|
| Blastx | Xyloglucan endotransglucosylase/hydrolase protein 31 from Arabidopsis with 72.37% of identity |
| Eggnog | xyloglucan endotransglucosylase hydrolase protein(ENOG411167N) |
| Kegg | Link to kegg annotations (AT3G44990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464965.1) |
| Pfam | Glycosyl hydrolases family 16 (PF00722.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |