| Id Trinity | TRINITY_DN48423_c4_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_362930 |
| Sequence | CTTAGTTTTAAATACTTTACCTCACTTTCTCTCACTCAAACTACACTGCATTTATAAACAACATAACCATTCTCTTTTCTGCTTACACACACTTCATTAT GTCTTTCTTTCTCTTTGCCATTTTAATCTTAATGGTCCCTTCAAGCAATGCTTATTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGTCT TTCAGCTTTTACAAAGGTTTTACAAATCTTTGGGGCCCTCAGCATCAAAGTCTAGACCAAAATGCATTAACAATTTGGCTTGACAAAACCTCAGGAAGTG GATTCAAATCAGTGAGGCCATTTAGATCTGGGTACTTTGGTGCTTCTATTAAGCTCCATCCTGGTTATACTGCAGGAGTTATAACAGCTTTCTATCTTTC AAATAATGAAGCACACCCTGGTTTCCATGATGAAGTGGACATTGAATTTCTTGGGACCACATTTGGAAAACCTTATACATTGCAAACCAATGTTTATATA AGAGGGAGTGGTGATGGGAATATTATAGGAAGAGAGATGAAATTTCATCTATGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTCTGGAGTC CTAAGGAAATAATGTAAGTCATTATTTATCGAAAAATGCGTTATTGTATAAAGTTTTTTAAACTATCATCATATCATTTATGCATGACTTTAATTATCAA TGTCTTTCGGTGTTAGGACATTCCTTAATTATTTTCACTGTATCTATGTGCTTGAAATGTCTAGATTCTCTGTGGAATTTCATAACACCTATGCTGCAGA TCTCTGACATCAAGGTTGATGGCCACGTTTTATTTTGCGGTTGCAATTATTGTATTTATTGCCATTGTTGCAATGCGGATTGCTATGTGAAATATTTTAT GATAAAAAGTATATTTTGAATTTGATGTTGTTCAATGTGGCTTGATGCGGCCCAAATGTGGTTCGATGTGGCCTGAATGTGGTTGCACTGCAGCCCGATG CGAATGATCTGTTATCACATCACAATTGCAGTGTGATGCAGTTGCGACGGTTACTATAACAATAACATTATGGCAATATTATGTGATGCGGTCTGCAATT TGAATATGTACAGGTACAATGTATGGGAGAAAATTAAACAGGTAGTTAGACGGTAAACAGAGAAGACATACTAGGAAATTTGATATACTGATGGATCAGA TATAGGAGAAAGGATAAAAAGAAGTAACAGTATAAGTTATATGTGGCGTTAACTTGTTTGGTTCCAATTTAGTATTCTAATCTTAATTTACTTTTACTGA CATTGTGAATAAAAAAAATGTCTCAGATTCCTTGTGGATGATGTGCCCATAAGGAGGTACCAAAGGAAGAGTGGTGCAACATTTCCACTAAGGCCAATGT GGCTTTATGGTTCAATATGGGATGCATCATCATGGGCAACTGAAGATGGAAAGTACAAAGCTGATTACAGATACCAACCTTTTGTTGCAAAATACACCAA TTTCAAAGCAAGTGGGTGCTCAGCCTATGCTTCTCTTTGGTGCCATCCAGTCTCAGCATCTCCCTATAGGTCTGGTGGGTTGAGTAGACAACAATATAGG GCTATGAGATGGGTGCAAAGATATTACATGGTTTATAATTATTGCCAAGATCACAAAAGAGACCATAGACTAACACCTGAGTGTTGGGGTTAAAACTTTA ATAGTGAATAATCTTGGGTATGCTTTTATGACCAAGAATATTGTTGATTTGTTATGTTTTTAGTTTTTTTTAAGTAAATACTCATTTTAGTCTCTCATGT TTTTCGGTCTAACTAGTTTGGTCCACAAAAATTAAAATGTATGTCAAATCGGTCCTTTTTAGCATGTTTTACATTACTTGATAAAAATTAGTTTGACCAT AAAAATGACTAATTTGATTAACATTTAAAAAAATTGCGATTATTTTAATTTTTTTTTAATTTTTGTGGGACTAAAGTAATAAGGTAAAAAAATACGAGGG ACTGAATGAAGTTTACTTTGGGGTAACATGAGATGTCCCCCTGTTTGACAGCAACATTGATGCAATTATGCAATTGAGTGTACGGCCTTAAGAATCCAAG ATGTAAGATTTAGTTTTTTCAAAGAGTCCCATTCTGATGGATTTTGCTTTTCAGTTATGTATCTTTTGGCTTCTAAAATATGCAAGGTATGGAGAAAGAG ATATCCATATCCAATGAAAATGCAGAGATGCTAAGAAGTATCAGGTCTTGGTGAATGTGGCCAAGAAGCATGTGTTAATAAAAAGTCAGGCTCAATTTTT TTATTATATCATATTTCTATTAGTGGAAAATAAATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160965; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362930
| Blastp | Probable xyloglucan endotransglucosylase/hydrolase protein 32 from Arabidopsis with 85.12% of identity |
|---|---|
| Blastx | Probable xyloglucan endotransglucosylase/hydrolase protein 32 from Arabidopsis with 83.63% of identity |
| Eggnog | xyloglucan endotransglucosylase hydrolase protein(ENOG410YDGS) |
| Kegg | Link to kegg annotations (AT2G36870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424819.1) |
| Pfam | Glycosyl hydrolases family 16 (PF00722.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |