| Id Trinity | TRINITY_DN48427_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_362366 |
| Sequence | GTCAGAAGAAGGGTGAGAGGAAAGCGTGGATGCCTTGGTTTTGGTAAGTTATGAAACCCAAAAAAGGAAGCATTCATTTCCTTAAACATAGTAATAATAA TAGTATAATAAATGAAAAATAAAAAATAAAAAAAGTAATAATTAGAAAAACTGAAAGCACAGAGTACAGAGCAAAAAGAGAAGAGTAGCTGAAAGTATGA AACAATGAAGAGAAGAGGTAAATGTGACTGAGGAACAAACCCACATTTGGATCCCAAAAAAGTCTTATTTTTCCAACTCCACTTTCTCTCTTTTCAAACA CTGCCCAATTTTCTTCTATTTCTTTCTATTCCTACTCCTTCATAAAAGTGACAGAGAGAGAGAGAGAGAAATAAAGGACCCTTATATTATTTTGCATTTT CACCAATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGTCTTCCAATGTCAAATCTAACCTTCATGATTTATCTGATAATGATGATGGGACCAA GAATGAAAAGGATCCTTTTTCTGGGTTCACTGAGTACACCTTGGATCAACTCAAAGTTGCTACTTCAGGATTTTCACCTGACAACATTGTTTCTGAACAT GGTGAGAAGGCTCCAAATGTTGTCTACAAAGGAATACTTGAAGATAATAAGTTGATTGCTGTGAAGCGCTTCAACAAATCTGCTTGGCCTGATTCTCGAC AATTCATAGAGGAAGCAAAAGCAGTGGGGCTATTGAGGAACGAACGATTAGCTAACTTGGTCGGGTTCTGCTGTGAAGGAGAAGATAAATTGCTTGTTGC AGAGTTCATGCCCAATGAAACTCTCTCCAAACATCTTTTTCACTGTAACTTTCCTCTCATTGATTCATTTTACTTATTCCTTACTTACATAAACATTTCT CATGCAATCGACACCGGAACAGATCTGATGTTTGTAGCCACTGTTAGACCTCAATGTTTGATTTGACATTTTGCTTTAGAAGCTAAGTTAAGAACCAAAT TTAAGTAATCTGCTCCCTCAACTTGACAAATTTTGTTGACATGGTTTGTATTGAGCCTTCAGGTGGAAAATCAGAGAAGCTTTTCCTCAATTGATCTGAA TTAATAGAATTTACAAGGAGAGTTCAGCTATATATAACTGTGTAACCAACTAACAGAATGGTAGAATCACATAGCCGTCGAACTTTTACATTACTGATCA TATAACTAACTACTTGCTTTCTGATTAAATACAAAATATGTCGAAAAACTACATATGCTAGAAGTTTGTGAAATCTTCTCCTAATCCTGATTTGGAATTT GTATGAACTGTTCTGGTAGGGGAGAGCCAACCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATCTAGCACAAGCACTGGAATACTGCAGCAGTA AAGGAAGGGCATTGTACCATGATCTTCATGCTTATAGAATTTTGTTTGATCAGGTAGTTGAGATTTTATCACCAGTTTTATGTTATGCCTCTTTGTCATT ATGTTTTATCGACTATATCGTTTGCATGGTGTAACGATGAACAGGACGGCAATCCTAGACTCTCCTGCTTTGGACTCATGAAAAACAGTAGAGATGGCAG AAGCTATAGCACAAATTTAGCTTTCACTCCTCCAGAGTACTTGAGAACAGGAAGAATCACCCCGGAAAGTGTAGTTTACAGTTTTGGCACTCTTTTGCTA GATCTTATGAGTGGGAAGCATATCCCACCGAGTCATGCACTTGAAATTATACGAGCCAAAAATTTCCAATTGCTGATGGACTCAGGTTTGGAAGGTCATT TTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCGCGTTGTTTACAATATGAACCTCGTGAGAGACCAAATGCCAAATCGCTTGTGACTGCTCT AACTCCTCTTCAGAAAGAAACTTCAGTATCATCATATGTTTTGATGGGCATAACAGAAGGGGGTGTATCGCCAAAAGAAACAGTTTCGTTGACACCTTTT GGTGAAGCTTGTTCAAGAAGAGATCTGACCGCAATACATGAAATGCTTGATAAGGTGGGCTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCTTTTC AAATGTGGACAAATCAAATACAAGATACACTTAATTTTAAGAAGCAAGGAGATTCTGCTTTTCATGCTATGGACTTCTCTACAGCCATTGACTGCTACAC ACAATTCATCGATAGCGGGACAATGGTATCACCGACTGTTTATGTGAGGCGAAGCTTATGCTACATGATGAATGACATGCCACAAGAAGCACTTGGAGAT GCCATGCAAGCACAGTCTGTATTTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAAGAAA GTCTTAAAGATGGCACAATGCTGGAGACCAGAAAACTTAGAAATTGAAACTCAACTCTTTTTTCCTTCACCTTCTCTGCTCATTTATCAAGCAAAAATTT TAAGTGCTGCTATTACTGTATGTAGTACATCTTTCCCCTTAAACCTTCTCAGATAGGCTTCAGAGTTCAGACACCATATTGTGATAGCTATGACCTCACT GCATTTTCTTTTGTATTTTGGGTCCAATGTTGTGAATCTCAAATTGCTCAATTTTTTATGATGATGCCATATTTGTAGTTAGCCATCCGGCTAGGTGGCT ACTGATGTTTTGTACTGTGAAGACAATCACAAACGCATTAAATTTTGGTATTTATTTGTTGTTTCAGAATAGAGAGCAAGTCTCGAATCTCGATGCAATG ATAAAATTGTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160998; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362366
| Blastp | Probable serine/threonine-protein kinase BSK3 from Oryza sativa with 72.05% of identity |
|---|---|
| Blastx | Probable serine/threonine-protein kinase BSK3 from Oryza sativa with 72.54% of identity |
| Eggnog | serine threonine-protein kinase(ENOG410XQTV) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448601.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |