| Id Trinity | TRINITY_DN48433_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_364288 |
| Sequence | TTCACCACTCCATAGATATATTGAGAGAGAATCAGAAAACCTTCATTATCGATCATCCCTTAGCTTCTTCTTCTTCTTCTTCTTCGACGATCATGTTACG GGTACGAGGATGATTGAGTATATTTTTGGTTATTGAATGGATTACACTGCTAGTGTTATGCTGCAATTATTGTGACATTTATTGATTGCGAGATATTATG GGGGGAGCCTGTTCTAGGAATCAAGACAGGGGTAATGAAGATAATTCTCGTAGGGTACTTTTGCGAAGATTTTCCAAAAGTGGGAGTTTGAGATGGTGGG CATCCTCATTTTCTTGTCCATCTGTAGACATCCAGTTACGAAAGGGAGAATGTCCGTCACTGCTGGAATTGTGCATCTTGAAAATAAATCAGGATATTGA CAAGTATGGCACATTCTCTATGTTGCCACGGGATATAAGTCAGCAAATTTTTAATAAATTGGTATTCTCCCAGCGTCTGACTGATGTTTCCCTTGAGGCA TTTCGAGATTGTGCTCTCCAGGATTTTTACTTAGGAGAATATCTCGGTGTCAATGATGCTTGGATGGATGTCATCTCATCACAGGGTTCATCTTTGCTTT CTTTAGACCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACTTATCTGAAAGATTGTGAAAATCTCATGTCTTTAAATCTAAATTACTGTGACCATAT TTCAGATCATGGACTGGAGGGCATCAGTGGTCTGTCAAGCTTGACAACTTTGAGTTTTAAAAGAAACGATTCAATATCTGCTCAAGGAATGAGTACCTTT TCTGGTCTTGTTAACTTGGCCAAATTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGTCTTGTTCATCTTCAAGGTTTGACCAAGTTGGAATCTCTCA ATTTAAAGTGGTGTAATTGCGTAACAGATGGTGATATGAAGCCTCTATCAGAGCTTGCAAGCTTGAAAAGTCTAGAGATTTCTTGCAGTAAAGTGACTGA CTTTGGCATCAGTTTTCTGAAAGGTACTGTGCCGTGCCATGTATTATTTGATGTTCCAAAGTAATAAGGATTATATGATTTACCCTTTACCAGGTACTCT TATGGGTTTTGTGTCAAGAAAGATTTATATTGTTATGTAATAATGTGTGTTTATGATATTTTTATCTCTTGGAGAGTGAATCTTGAAATAGATAGGTTCA ACCTCGCATTTTCATCTACATCTGTGTGTGTGTGTGTGACTGACGATGCAAGGGCTGACTGTTGTTTTTGTGATGGCAAGAAATTTGAGTGTAACAAGAT TTTCTTGAACTGAGTTATCAATTTAACGCTTTTTAGGAATGCATTTTGTGGTGTACAATTAACTAATTATTGGTTTTGAAATTATATGTTTTATTTTGTA GCTCAATTTGGTTCATATTGTTTACTTTTTTATTTATTTGTTTTTTAATGAAAATTTAGTTAGATACTTCATGTCAATTGTGCTTCATTTTAAAATGTAG ACTCTACTCGCGTAAAAGACAGTGCAGATCTAAAAGTTCATTCTAAGAAAATCTACTTATTTGATGATGAAATATTTTCCCTTTTATCCTTCTAAAGTTG AAATTAAGTTGGTTAATCAACATGTACTGTCAAGTGTTATTTCTTTACTAATGTGTGAGTGCATAGATACTCAGCTTACAAGTTTAAAATTGAGTTTTAG AGTTTTATGTTCATCTTCCTTTCATCCAGTTCAATATTGTTTCGTTTCATTTCAGGATTGCAAAAGCTTGCCCTGTTAAATCTGGAAGGTTGCCTGGTGA CCGCTGCATGTTTGGATTATCTTACAGAGCTTTCTGCCCTATCAACCTTGAATCTTAATAGATGTAATCTTTCTGATGTTGGATGTGAAAAGTTTGCAAG ACTGGAAAATTTGAAAGTACTAAACTTGGGATTTAATGACATAACGGATGCATGTTTAGCACACTTGAAAGGATTAACAAAATTGGAGAGCTTGAATCTT GATTCATGTAGGATTCGTGACGAAGGATTGATCAACTTGGCAGGCCATAGGAAATTGAGCTGCTTGGAATTGTCTGATACAGAAGTTGGAAACAATGGGT TACACCATTTATCAGGATTGTCTAGTCTGGAGAGGATAAACCTATCATTCACAGTGGTTAGTGATAGCGGTTTGAGGAAATTGTGTGGACTCTCATCTCT AAAGTCACTTAATTTGGATGCTCACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTTTGACTGGGCTTACTGAGCTGGATCTGTTTGGCGCTCGA ATCACAGACTTTGGAACAGACTATTTGAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161047; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364288
| Blastp | F-box/LRR-repeat protein 16 from Mus with 31.33% of identity |
|---|---|
| Blastx | F-box/LRR-repeat protein 14 from Homo with 34.45% of identity |
| Eggnog | F-box and leucine-rich repeat protein 16(ENOG410XQRM) |
| Kegg | Link to kegg annotations (214931) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456694.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |