Id Trinity | TRINITY_DN48433_c2_g1_i10 |
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Name Transcript | Ll_transcript_364297 |
Sequence | TTCACCACTCCATAGATATATTGAGAGAGAATCAGAAAACCTTCATTATCGATCATCCCTTAGCTTCTTCTTCTTCTTCTTCTTCGACGATCATGTTACG GGTACGAGGATGATTGAGTATATTTTTGGTTATTGAATGGATTACACTGCTAGTGTTATGCTGCAATTATTGTGACATTTATTGATTGCGAGATATTATG GGGGGAGCCTGTTCTAGGAATCAAGACAGGGGTAATGAAGATAATTCTCGTAGGGTACTTTTGCGAAGATTTTCCAAAAGTGGGAGTTTGAGATGGTGGG CATCCTCATTTTCTTGTCCATCTGTAGACATCCAGTTACGAAAGGGAGAATGTCCGTCACTGCTGGAATTGTGCATCTTGAAAATAAATCAGGATATTGA CAAGTATGGCACATTCTCTATGTTGCCACGGGATATAAGTCAGCAAATTTTTAATAAATTGGTATTCTCCCAGCGTCTGACTGATGTTTCCCTTGAGGCA TTTCGAGATTGTGCTCTCCAGGATTTTTACTTAGGAGAATATCTCGGTGTCAATGATGCTTGGATGGATGTCATCTCATCACAGGGTTCATCTTTGCTTT CTTTAGACCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACTTATCTGAAAGATTGTGAAAATCTCATGTCTTTAAATCTAAATTACTGTGACCATAT TTCAGATCATGGACTGGAGGGCATCAGTGGTCTGTCAAGCTTGACAACTTTGAGTTTTAAAAGAAACGATTCAATATCTGCTCAAGGAATGAGTACCTTT TCTGGTCTTGTTAACTTGGCCAAATTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGTCTTGTTCATCTTCAAGGTTTGACCAAGTTGGAATCTCTCA ATTTAAAGTGGTGTAATTGCGTAACAGATGGTGATATGAAGCCTCTATCAGAGCTTGCAAGCTTGAAAAGTCTAGAGATTTCTTGCAGTAAAGTGACTGA CTTTGGCATCAGTTTTCTGAAAGGATTGCAAAAGCTTGCCCTGTTAAATCTGGAAGGTTGCCTGGTGACCGCTGCATGTTTGGATTATCTTACAGGTTGA ATTCCTTCGTAGACTTGTAGGCTTATTCGTTAATTTTGTTGTGATTATATTCATAGAGGGTGAGCCTCAACACAATGACAAGGTTGCTGCTTAGTGACCA ATGAGGTCACGAGTTCAAATCCTGGAAACAACCTCTCCGGTTACAGGGCTAAGGATATGTACATCTACCTCCTCAGAACCCAGTTGTGCATTGGGTCTTC CTTCTTTTTTATATATTTAGACATACTGGCACCAAGTCACCACCTAGTTGTTCGGATAATCTTTGGTTATTGGTCCATGAATGCTTTAAGCTTGTAGTTG AAACACTGTTTATCAGGATACCTTCAGCATATCAATCCCAGCAGATTGTGATGTGAGCAAAGAAAGTCCCCTGACTGCGAAATTTTAGACAACAAAATAT GGGGTAGAAGAACATGATATGAACAATTAAATCATAAAATTTATATTGCTGAGTTTATTATTTATTTTAATCTTATTTTTCTCAGGGGTTCAGAGTTTAG ACCTTGATATCTTTACAAAAAAAAACATGACTTTTGTTTCCATCAAGTCAAAAGTCAAAACATTATTCACCTTTTTGCTTTATTCAGTAGCTTTGAGGGT TTAATATCATGTGTCTGCTTGACCCATTTAAAAGTAAGAGGTTTCAACTGATCATTATTATTACATAAACACACCATTATTTGAACCAGCTGCTATTAGT TTTATTATTATCAGTGAACTTCTTTTGTTGGATGTAAAGTTTAACTTTACTACATCTTTCTTGTGTGTAATAACTTACTAAGACCTGAATACTGATTCAA AGTTTTGATTTGACGTTGACATGTTTCCTGCCAGAGCTTTCTGCCCTATCAACCTTGAATCTTAATAGATGTAATCTTTCTGATGTTGGATGTGAAAAGT TTGCAAGTAAGTTGCTAAAACTTGTATAGCCACCTTTTTAAGGCCATAATTTTATATAGAGATACTAGATTAAGAGCACTGGTTAAGGAATCAAAGATAG AATGATTTTATTGAAATTGGTATCACAACAATCAAATCTTAATCCCACTTGGTGGGGTCGGCTAATTTTGTTGAAATTGGTGTACTTAATTAATTAAAAG TTTAAAACTTGTAATTTCGAGCACAACGTTATACTTTTTGATACCTTAGCTAGTGCCCTAATTAGCAAGACCCTTTTACATTTTATAATATTCTTATTAG ATTTTACATTTTAGCACAAGAGGATTATTGGGGGCTCTAATTTTGTAGCGTTACTTGTTACTTCTCTCTCTGTCTCTCTCACAGGACTGGAAAATTTGAA AGTACTAAACTTGGGATTTAATGACATAACGGATGCATGTTTAGCACACTTGAAAGGATTAACAAAATTGGAGAGCTTGAATCTTGATTCATGTAGGATT CGTGACGAAGGATTGATCAACTTGGCAGGCCATAGGAAATTGAGCTGCTTGGAATTGTCTGATACAGAAGTTGGAAACAATGGGTTACACCATTTATCAG GATTGTCTAGTCTGGAGAGGATAAACCTATCATTCACAGTGGTTAGTGATAGCGGTTTGAGGAAATTGTGTGGACTCTCATCTCTAAAGTCACTTAATTT GGATGCTCACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTTTGACTGGGCTTACTGAGCTGGATCTGTTTGGCGCTCGAATCACAGACTTTGGA ACAGACTATTTGAAAAAACTTAAGAACCTGACATCCCTGGAAATATGTGGTGGAGGATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCTC TAATGTGCTTAAATTTATCACAAAACTGCAACCTTACAGACAAAACCCTGGAGTTTATTTCTGGGCTTTCTGGGTTGATTTCATTGAATGTGTCAAATTC TCGTATCACAAATGCTGGACTGCAACATTTGAAAACACTAAAGAATTTGAGGTCTCTGACATTGGAGTCATGTAAGGTGACAGCAAATGACATTAAGAAA CTTCAATCAACATATCTCCCAAATTTGGTAAGCTTCAGACCAGAGTAGTTACTAAGGGAGAGATATTCTGATATGTATATGTATATAAATAAGATATACT AGCATATGTTAGAGAGACATGGGAATACAACCTCAAATTTGTACATAGGCTAATGGCTTCATGAAAGGGTTGATGCTATGATGATATGTATATATATAAG GGTAAGATGTAATGATATATGTTGTGGAGAAACATGGGATGACAATTTCATATTGTATATAGGCTATTTATTTTATGCATGAATATACTTAAGCATTATG CTTGCTCAATCAACACTAAAAATTGTTGTTTTTATTTTGATTTTCAATGATTATTTTTTCTCAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_161047; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364297
Blastp | F-box/LRR-repeat protein 16 from Mus with 32.22% of identity |
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Blastx | F-box/LRR-repeat protein 14 from Homo with 32.96% of identity |
Eggnog | F-box and leucine-rich repeat protein 16(ENOG410XQRM) |
Kegg | Link to kegg annotations (214931) |
CantataDB | Link to cantataDB annotations (CNT0000802) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456694.1) |
Pfam | Leucine Rich repeat (PF13516.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |