| Id Trinity | TRINITY_DN48433_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_364294 |
| Sequence | TTCACCACTCCATAGATATATTGAGAGAGAATCAGAAAACCTTCATTATCGATCATCCCTTAGCTTCTTCTTCTTCTTCTTCTTCGACGATCATGTTACG GGTACGAGGATGATTGAGTATATTTTTGGTTATTGAATGGATTACACTGCTAGTGTTATGCTGCAATTATTGTGACATTTATTGATTGCGAGATATTATG GGGGGAGCCTGTTCTAGGAATCAAGACAGGGGTAATGAAGATAATTCTCGTAGGGTACTTTTGCGAAGATTTTCCAAAAGTGGGAGTTTGAGATGGTGGG CATCCTCATTTTCTTGTCCATCTGTAGACATCCAGTTACGAAAGGGAGAATGTCCGTCACTGCTGGAATTGTGCATCTTGAAAATAAATCAGGATATTGA CAAGTATGGCACATTCTCTATGTTGCCACGGGATATAAGTCAGCAAATTTTTAATAAATTGGTATTCTCCCAGCGTCTGACTGATGTTTCCCTTGAGGCA TTTCGAGATTGTGCTCTCCAGGATTTTTACTTAGGAGAATATCTCGGTGTCAATGATGCTTGGATGGATGTCATCTCATCACAGGGTTCATCTTTGCTTT CTTTAGACCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACTTATCTGAAAGATTGTGAAAATCTCATGTCTTTAAATCTAAATTACTGTGACCATAT TTCAGATCATGGACTGGAGGGCATCAGTGGTCTGTCAAGCTTGACAACTTTGAGTTTTAAAAGAAACGATTCAATATCTGCTCAAGGAATGAGTACCTTT TCTGGTCTTGTTAACTTGGCCAAATTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGTCTTGTTCATCTTCAAGGTTTGACCAAGTTGGAATCTCTCA ATTTAAAGTGGTGTAATTGCGTAACAGATGGTGATATGAAGCCTCTATCAGAGCTTGCAAGCTTGAAAAGTCTAGAGATTTCTTGCAGTAAAGTGACTGA CTTTGGCATCAGTTTTCTGAAAGGATTGCAAAAGCTTGCCCTGTTAAATCTGGAAGGTTGCCTGGTGACCGCTGCATGTTTGGATTATCTTACAGAGCTT TCTGCCCTATCAACCTTGAATCTTAATAGATGTAATCTTTCTGATGTTGGATGTGAAAAGTTTGCAAGACTGGAAAATTTGAAAGTACTAAACTTGGGAT TTAATGACATAACGGATGCATGTTTAGCACACTTGAAAGGATTAACAAAATTGGAGAGCTTGAATCTTGATTCATGTAGGATTCGTGACGAAGGATTGAT CAACTTGGCAGGCCATAGGAAATTGAGCTGCTTGGAATTGTCTGATACAGAAGTTGGAAACAATGGGTTACACCATTTATCAGACTATAATTATCTCTGA TCATTGTTCCTGTTGCATCTCATCTGATTTGGATTGTCTAGTCTGGAGAGGATAAACCTATCATTCACAGTGGTTAGTGATAGCGGTTTGAGGAAATTGT GTGGACTCTCATCTCTAAAGTCACTTAATTTGGATGCTCACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTATGTGCCCTATGATAAATTACGA AAATGGTTTCTGTATTTCTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161047; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364294
| Blastp | Internalin-A from Listeria with 32.73% of identity |
|---|---|
| Blastx | Internalin-A from Listeria with 31.83% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (LMOf2365_0471) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456694.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |