| Id Trinity | TRINITY_DN48436_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_361886 |
| Sequence | CTCTTAAAAATTATAATGATCTCCATAGAATATCCAAAATTAAGGTGAGTTATGTTGTTACTTTGTTGTTCTTCAACTTTTGTCCCTAACTCCCCATATT CTCAACCCAGACCAAACCTCCCACTGAAACAGGTTGTGAAAATTGAAAGCAAAGCAAAAAAATGATGAAATCCATTCTTGGTTGTTGCAAGTTATATATA TCAGAAAGCAGGAACAAGAGTGCATTGGAATCAATTGAAAGTGCTTCTAAGCTTTTCCCTCATGCTCCTATAATTAACAAGTTTGAAGATGTTGTATACA ATAGAGTTGGTTACACCCTTGTATCTGAGTTGCATCCAAATCCAGCAGAACCTTCTTCAGAGCCATGTCATTTGACTAGTGCTGTTCTTGCAATGGTAAA GGTTGCTTTTGAGACCATTGATTTTGAGCTTCACAGTGGAACTCATCCTCGACTCGGAGTTGTTGACCATATATGCTTTCACCCCCTGGCTGATGCTTCC TTAGATCATGCAGCTGGGACTGCTGGGTGTTTAGCTAAAGACATGGGTTCTAGCCTGAAAGGTAAAGTGTTAAGGTTCATTCTTACATGCCTCAAAATAT CCTCTCCGCTTGTGGGGGTAAGGTTGTGCACATCTGCATCCCCAGACCCAACTAAGTGGGAGCCTCGTGATCTAGACCACCCTTTTTAGGCTCATTCTTA CATGATTGTGTAGTAGTCCTGCAAACAGGACCCCATCCTTTACTTTTGAAGGTAAAGCAGAAAAATACACATCAGAATTACATTCTCTTTTGTCTTTATT TCTTACAATAAGCATTACCATGGTTAAAGGGTTGTTGCTTGTTAGTGTTAGTTAGATATTTAGATTAGTCTATTGAGTCAGGAAGTTGGTCACTAGTTAT ATTTACTTCTGCTGTTCAATATAAGCAACATGATTGGGTTTGTGTACTCACCTTTCACACATTCAGTAAATCTCAAGCTTCTCATTCTCTGTTGGCTCTC TCATCTCTCTCCTCTCTACCATGTTTTCTAACAGTTCGTAGCAACAAGCACGACTTGGGAGTGTATGATATTTATTACAGGGATGGGGTGGAAATTACTG TAAACAAAGTGAAAAGTAGACTCTTTTAACATAAAATTGATCAGCCTTTTCAGATTGTCTGATTAATTCAGAAGTTCGAGTTATCAACTGTTTATGTACC AATCAATTTTAACCACAACCATTGTTGAGTAATTTCTTATAGATGCTTGTATATTGCTTGAGTTGATGCCTCTTGTTCTTTCTTGGAATTATGCCGCATT AGTGGCATTTACACAATTAGCATTTGTTTTTAAAGGTGAGGTATATTTGATTGTTGGTTAAAAATTATGTCTGGATGAAAAATTCTTCTCAGCTCGCAAG TTTTGAATTGTCGAGTATTTCCTTGTTGAGCATGACTAATTTCATAACTACTATTTTATCGACTGATAAAGAGACTATGCAACCATCTTTAGTAGGTCTA TCATCCTTCTGAATTTAGCATTATGGTCATTAAATTCCTTGCAGTTCCTACTTACCTATATGGAGCAGCACATGAAGAAGGGAGAACACTTGATTCAATC AGAAGAACATTTGGTTATTTCAAGCCAAATTCTAGTGAAAACCAGTGGATTGGTAGTCAAGAGTACTCTTTACCACTGAAGCCAGATAATGGTCCAGAAC AACTGACTCCAGCGAAAGGTGTTGTGGTCATCGGAGCAACCAATTGGGTTGATAACTACAATGTCCCTCTATTATCTTCCGATATTAGCGCTGTTCGTAG AATTGCGAAACGGACAAGTGGTAGAGGTGGTGGACTTCCTTCAGTACAGGCAATGGCACTTGCACATGGCGAAGATGTCATCGAGGTAGCCTGTAATTTG TTGGATCCAAAGAAAGTTGATGGAGAAATAGTACAACAAGAAGTCGAGCGACTTGCGAAGGAAGAAGGTATTTCTGTGGGGAGGGGATACTTCACAGACT TTTCACAGGAAGAAATAATTCAAAGTTACTTGAAGTTGTTTGAGGAGAGAATTTGATGTCAAAGAAACCTTGTCCCTGGTATGTAAGATTTGTTAAGTAA TTGTCTTGAGAGAAGATTGCTTTCTCATGTGCTTGGAAGGTTTTTGCTATTTCTGAATTTTGATTCTAATGATGCATTTTTTAGTACTACTAAAAGTATT CCCTCACTCTATGAGTAAGGAACTAATCTCTTTTGGGGTGTGTGACTGACCCTCCCAACAAGTGCCGTTCCTAATAATCGAACCTTTGATATTTTGATCA TCTCATGGATCTAACAGAGCCTTGCAATGGTGCATTTGATTAAATGCAGGACAACAACACAAAAATTTGTATCTTGTATGATTTTGAAAATGGATTCAGT ATTGGATAACAACCTCCTTAAAGACACCACAAAAGTCACATTTTTTGTCCCCCTCTAAAAACTAGAGGGAAAACTTTGTCTGATGCACAAAATCTTGTAC TATGTTGCCACTTGAATCAAATGCACCTTAAGAGTGAGTTTGGTATTTCCTTGAAATCAAGAGAAAAGGTTATAGATGATTTAGTTCATATTAAGCTCAA TGTTATATTTATACCTTCACTTTCATGGCATCATTAAACTGACATTAAGGATTTCATTCTATCTTCACACATCATAAGCCTCCCAATTTTGCTAATCTAT GTATTAAGCAATGTGCTGCTGAACATTAAAATATGAAAGAACAAGACAATGTCACCTTTCAAAGCAGTTTTAGTTCGTGTACCTTGCAGAAATGCCACTT GTAGACTGAACTTGTGCATTGAATCCGGGAAACATCGTCACTTACGAGGATAAGTGTGTGTAACTGTGTATATTTACTATTCCCAAATTTCACTAGGTGA GAATATTGTGTGCACGTGCCACCTTTCTACCGAATTTGTTCACTGATTGGTTTCAGATTGTATAGATGTATTTGTTGGAAGACTTTTTTAAATTGTAAGA AATATATAAATGTTTCAAACTTCAATACTTAATACTAATTCTTGAAAATTCCATTTCAACAAAATGCTGGAACAAATATAAGGCTATGTGTCGCGCCCCG ATTTTCGGCTGCACGACTTGTTTAGAGTCGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161055; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361886
| Blastp | Glutamate formimidoyltransferase from Streptococcus with 25.19% of identity |
|---|---|
| Blastx | Glutamate formimidoyltransferase from Picrophilus with 31.78% of identity |
| Eggnog | Glutamate formiminotransferase(COG3643) |
| Kegg | Link to kegg annotations (SPy_2083) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437031.1) |
| Pfam | Formiminotransferase domain, N-terminal subdomain (PF07837.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |