Ll_transcript_362633

• Id Trinity: TRINITY_DN48440_c0_g4_i3
• Name Transcript: Ll_transcript_362633
• Sequence: CATTGGCTATGATAACAAGTCTATTGAAATTCGAAACTTCCTCGGCGAAAAGAAGGTGAGGAAAGTGGACATGCTTGATGGTGTTAATATAATTCGATCC GAAAAGGTCAAGGATGAGTTGGTTTTGGATGGAAATGACATCGAGCTTGTGTCTCGCTCTTGTGCCCTCATTAACCAGAAATGCCACGTTAAAAACAAAG ATATCCGGAAGTTCCTTGATGGTATCTATGTTAGCGAGAAGGGGACAATAGTTGAAGAGTAGATGATTTGAACAAATAGGAACATTGATGTTAATTTCAG TTGGTCATTTGTCTGAGTTTTTTACGTAGTTGTGCTAATCTGGTGACTATTTTTGTTATCTTTAAGTTTTTGGTTTTACAATTTTGTGTTGCCAAATTTA TCATTCTTGAAAATCTTATTTAGAATTTTTAGTTGCTGTTATAACCATCTGTTTTTTTCTTAGTTTTGGTGTTACCTCCCAATTTTAGCACCCTTTAGAG TGTTACCTCCCAATTTTAG
• Tissue: pods
• Gene name: LI_gene_161080;
• Additional information: -

Expression of Ll_transcript_362633

FPKM

• PAB: 9.2
• PNAB: 38.5
• PS1: 23.1
• PS2: 33
• PS3: 32
• PW1: 25.3
• PW2: 15.7
• PW3: 11

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362633

• Blastp: -
• Blastx: 60S ribosomal protein L9-1 from Arabidopsis with 89.53% of identity
• Eggnog: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity)(COG0097)
• Kegg: Link to kegg annotations (AT1G33120)
• CantataDB: Link to cantataDB annotations (CNT0001709)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431546.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;