| Id Trinity | TRINITY_DN48442_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_362185 |
| Sequence | GAACCCTTTTAACCAACGTATGTTGTTTCAAGTGATACATGTTTGATTCCTCTTAAGCAAGATCTCGGGTGAATGGAAAAATGCCCACTGGAAGAGTTAG TCCCACATACTCGTGGATATTTCCTGCTCGGACATGATTGTCTCCAGTGCGAAAATAAATATTCGAAACCATAAAAAAGAAAAAGAACCCCCTTTCCATA TTGTTTTAACTCTACCTTAGCCTCACATATGACAAAAATAGAACACAATTAAAAGGGACAATCTAAACATACAACTTCTAAATGCCATAATCTCTCAGAT GGGTGCTCTTCAGTTTACACTTCTTCTCTATTTGACATTACTACATTCATGTAACATTGCAGCTTACAAGGATGTAGATTGGAAGAAAGCTACTGCAACA TACACCAAAGACACTGAGGGATCACTTATTACAGAAGGAGCTTGTGGTTATGGAGACCTTCATAAAGCCAGTTATGGAAAATATAGTGCTGGGTTAAGCA CCATTTTGTTCAGTAGAGGGAGTACTTGTGGGGCTTGCTTTGAGATCAGATGTGTTGACCACATCTTGTGGTGCATGCTAGGAAGTCCAACTGTAATTGT TACTGCTACGGATTTCTGTCCTCCAAATTATGGGCTATCAGTTGATTATGGTGGCTGGTGTAATTTTCCGAGAGAACATTTTGAGCTGTCACAGGTTGCA TTTTCTGAAATTGCCAAGAGAAAAGCTGATATAGTACCTGTTCAGTATAGAAGGGTTAAGTGTCAAAGAAGTGGTGGCTTGAAATTCACTATGAGTGGAA GTTCTCACTTCTTTCAGGTCCTGATTACCAATGTAGGGGTGGATGGGGAAGTGGCTGCTGTGAAAGTTAAGGGATCAAGAACAGGGTGGATACCTATGGC AAGGAATTGGGGACAAAACTGGCATTGCAATATCAACCTCCAACATCAGCCTTTGTCCTTTGAGGTAACTATCAGCAGTGGAAAAACACTCACATCTTAT AATGTAGCCAATGCAAACTGGCAGTTTGGACAGACATTTGAAGGAAAACAGTTTTAGCATGATTAGATTCAGAACCAAATAGGATAAGATTTGGGAGACT TTAATTCTTAAACTGGAAACTGTGATATATGAATCAGTTACAAAGTGCACAAGCTTACCTGTATGTTTGCTCATGATTCATGATCAAACATTGTTCAAGT CTGTGGTAAAAAAAATGTTCAAAAAAGAACATTTTATAACATAAAGATGGGTAAAGGGCTATGCATGATCCCTATCCTTAGAATTCTATTAATCAAAAAG CAGTCACTGATGGAATATGTAAACACTCGGAAAGTGAACTCCTTTGTAATTAAAGTAGTGAAATGAAATCAAATTTGTTTCTTTTCATTTTACTTTATGA GAACTCTGTTTCTTTTGCATCTTGCAAATTGTTTTTGATGCTTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_161092; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362185
| Blastp | Expansin-A20 from Arabidopsis with 62.6% of identity |
|---|---|
| Blastx | Expansin-A20 from Arabidopsis with 65.67% of identity |
| Eggnog | plant-type cell wall organization(ENOG410YAZE) |
| Kegg | Link to kegg annotations (AT4G38210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414175.1) |
| Pfam | Lytic transglycolase (PF03330.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |