Ll_transcript_362899

• Id Trinity: TRINITY_DN48448_c3_g2_i2
• Name Transcript: Ll_transcript_362899
• Sequence: CACTCGCACGCTTCTCTTCATTTCTTCCTCTTCTTGCGCCTCTTCTCTCTCTCTCTCTCTCTCTCTCAGACAGACACAAAGGTATCTCTAATTGAGTGAG TGCTCTTACTTGGATTTGCAGCTGGAATTCTTCTCTCAACTTTATGTTCTTCATTAGGAAGCCTTTCAGTCTAGACCATGACAACCAATATTTCCTTTGC TCCTGGAATTTATAAAGAAGAAAAGGTTCTCTTTGAGATTGGGAATTCTGAAAAGCAGTTGTGGGCATTGATCCATTCTAAAGGCCTATTGCACTCTGAT GCTCAAGACTTGTACCGCAAGGTCCGGTCTAGTTACGAGAGGATAATATTGAATGGTCAAACACATACAGAACTTCAGGATGTTGAATATTCCTTGTGGA AACTCCACTATAAGCATATTGATGAATTTCGCAAAATAATAAAGAAAAGCTCTGGTAATGTGGAGAGCAGAAAGCCAGGAATGCCGCAAGATGGTGTTGT ACAGAGAAAGAACGACAATCATTTAGAGTCATTTAAGTCATTTCTGTCACAAGCTATAGAGTTTTACCAAAATCTGATTCTAAAGCTCAGAGAACATTAT GGAGTCCCAGTAGAGGCTTTATTTTATAAAAAGGGTCGGATTTCTAGTTCTATTGAAGCAGATGTCATGCTGGAATGCCAATATTTATGTCATAGGTGCT TAGTTTGTATAGGGGATCTTGCAAGGTATAAACAACAATTTGAAATCCCTGATGTTCAAAATCATAGTTGGTCAGTTGCTGCTACTCACTACTTAGAAGC AACAAGGATTTGGCCAGATAGTGGGAACCCACAAAATCAGTTAGCTGTATTAGCAACATATATTGGTGATGAGTTTCTTGCTTTGTACCATTGTGTAAGA AGTTTAGCTGTTAAAGAACCTTTTCCTGATGCCTGGAAAAATCTTATTTTGTTGTTTGAAAAGAATAAGTCATCTCAACTGCAATATGTTTCCGGAGAAG TCTGCTTTGATTTCTTAAAACCTTCTGCAAGAATTGGTGAAGAGACCAAAGCACAACTAAAAGATGTTGACTCAAACTGCAATAAACTTGAAGACAAAAG TAATTATTTTACAGATACAAAGTTATGGCCTCTGATAGTCAGAACAATAAGTTTCTTCTTCATAACATCAAGTTTAGAAGAATTCCATAGTGCACTGGCC TCTACCATTGGGGAGTTGGATAAAATGATGGAGCTAGAAGATATAGAACTAAAGACCATGTTGGAGTCATATAGTCAAATGGATATGGCCAGAAAAGGTC CTTTCCGAGCTTTTCAAGTAGTTTCTTTATTCATCTTTGCCCTGAAGAATCTAAATGATAAACTTGAAAAAAATGATTCAAACAGCAATAATGATAGGCA GTTGATGCAGCTGGCATTAGCTGCTGCGTTTAGCTTCATGGGACGTTTTGTTGAAAGATGCTTGAAGGCGAGTTCTTTGAATTATTGCCCCTTATTGCCT TCTGTGCTTGTTTTTGTGGAGTGGTATTCAAGCATGCTTGACACAATTGAAGTATGTGCAGATGATCAGAAGAGCAGAAGAGCTATTTCTTACTTTTTTG ATGTATTTGTGGAACTTTTAAACAAGCTAAATAACAATAGAAAGGAAACCAAAAAGCTTCTTGATAATACCCCTCTATGGGAGGATTATGAGTTGAGGGG TTTTCTACCTGTAGCTTGCTCACATTTCTCATTAGATTTTTGTGGTAATTGGGAGCATATAGATAATTTTGAAAGCGGAATTGAATTGCGTGCTGAGCGT ATCAGAGAAGCAGCAAAGAAATTTGCAAGTATATCGAATAACTCGACAAAGTGGGTTTCATGTGATGAATCAGGACAAAAATTTTATGCTCCTAGATCAG ATGAAAATAAAGACAAAAAAGAAACAAAAAAGTTGGACTCCAGTGACAATAGTACAAGAGGGGAAGAGCCTAATCAGAAAACTATCAAAGACTCAAGGGA ACATGGCAAAGGGATGATAGATGAGAATCCAAGTAGCTCCAGTGGCCATGAAAAATTTGATGTGGTGGAAGAAGAAGAAGTTATTCTCTTCAGGCCACTA ACAAGGCATAATTCGGCACCATCACACGTCCCTTCTATCTCGAGTGATGGGAGGATGTCACCAAGAGACAAGGATGACCAAAGCTTACCTTCTGATGATT GTTTGCGCTGTGCTACATCACTTCTTATGGCACAAAACCCATCTCAAAGTGATCCTTGGGAATTCCATGATGACAATTTGAATTTGAGGAGTGAGAAATC GTTCAAACTTCAAGAACATGCAACAAAGGAATCAAATGCATACACTTTTTCTGAAGCTCTAATCTCGGCTGGCCCTCCTTCTCTCAATGCTTGGGTACTT GACAGAGGAAGTTTCAGCTACAACAAAGACAATGGGACTAATGGTGATAGTAAGCACAAGTTGGAGCCTATTGACGAAATAGCTTCTTCATCCTTGGAAG GTCTTTCCATCAATAAAACCGAGTTTTCAGACATTACTTCAGTGGATGCAGCATCTTCAAACTTCCATTCTCCTGCTACACATTCTATTCCAATGCCTTC TGCTCCTTTATTGCCTGACAATGCTACTTGGTTTAGTGATTTACAATCTAGTTTGCCTGCTCCATTATTACCACACACCACACCACCAGTAAGTGCATAT TCAGATTGGAGTTCAACTTATGCACCACATGGATATGATCCTAGATTCCAAGCCTTTTCCAATGGTTTTCCACCACCTGGAATAATGACTTCTTCGGAAT GGCTGCGTTGGTATAGAGCGAATTACAAACCAGAGTGGAGCAACAATTATATGCAGCCTACTAGTACTCATTTCAATGCTCCGGCAAATCACGAAAACTT GCTATATCATGGCAGCTACAGGTTTAATCAAATTGATAGATGGGGCAATCCTTTGTCTTCTGATCAGTGCAACACATATATCGAACCACCATATCCCCAA CTATTACAGCCAAGCCACTTCAACAACTTCCAAAGAGCTAGTCCTTATTGGTGTGGTGTTGTGACAGACATGAAAAAAGAATCGCAGTCTCTGCTAGAGT ACTTGAAGGAGGAGGAATGGCGACTCCAGCGAGATTCTAACCTTAGAGGGCCTACTTTCATGGGAAACTAGGAATCATCAGCTTAACCTTTTGTTCCATG TACCATTATGTAATTGTACACCTTGTTGAGCACTTTGTTCTATAGGATTCTTGGAGAAAACAATATAAATGAGCACAGTTTAATGTATATACTATATAAA TGTTCATTTCCTGAATGAAAAATTCCAAAGAATGTGGATGAAATATTCTTCATTCAAAA
• Tissue: pods
• Gene name: LI_gene_161139;
• Additional information: details;

Expression of Ll_transcript_362899

FPKM

• PAB: 7.9
• PNAB: 7.3
• PS1: 12.3
• PS2: 9.7
• PS3: 11.7
• PW1: 9.7
• PW2: 15
• PW3: 21.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362899

• Blastp: Protein SMG7L from Arabidopsis with 37.88% of identity
• Blastx: Protein SMG7L from Arabidopsis with 38.06% of identity
• Eggnog: Telomerase activating protein Est1(ENOG410ZUHD)
• Kegg: Link to kegg annotations (AT1G28260)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425260.1)
• Pfam: Telomerase activating protein Est1 (PF10374.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;