| Id Trinity | TRINITY_DN48453_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_364412 |
| Sequence | GTTTTTATTATTGAAATTGGCTTCACAATTAAGCTATATATATATGTGTGTGTGTGTGTGTGTGATGTTTCTCATGATGGAGTTTGTGTCTTGAGTTTTT CTTCAATCAATTAATTTTGAGGAAAAGTACCATATTTGTAAGATTTATGATCCAAGTCAAACAGAATTGAAGTCTTGAAGATTTTACTAGTATAGCAGTT CTTGTTCATGTTGTTGTAGAGAGTCTATATTAAGATTCATGTGATTGTTGAATCATGTTATTGCAGGGTGCAGGCACATAAGCAAAGGTGTTACTAGGAT TTAAGGAAAATTGGGAACTGCATCAGAGTTCAGAACAAGGAAATGGGGTCTGAAGTTACTATTCATGTGACTGGATTCAAGAAGTTTGGAGGGGTTGCTG AAAACCCTACAGAGTCAATAGTTAATAATCTGAAGGGTTATGTTGAAAGAAGAGGTCTTCATGCTGGTGTTACTCTTGGCACCTGCACTGTGCTTGAGGT GGCTGGGGATTGTGCACTTCAGCTATCCCAAACCATGGAATCTGTTATATCAAAAACTGATGATATCAGCAATGCAAATGTTGTATGGCTTCACTTAGGG GTGAACAGTGGAGCTCAAAGGTTTGCCATTGAGCGACAAGCAGCGAATGAAGCCACTTTCCTCTGTCCAGATGAGTTAGGATGGCAGCCAAATCAAGTCC CTATCGTCGTTGAAGATGGAGGAATTTCTCGAAAAAGAGAGACTTCTTTATCTGTTGAGGCAATCTTGAAATCTTTGAAGAAGGGGGCTTATGATGTGAT GATATCGGAAGATGCAGGACGCTTTGTTTGCAATTACGTGTACTACCACTCTCTCCGATTTGCAGAAGAGAAGGGTAGCAAGGCTCTTTTTGTCCACGTT CCGCTCTTTTCGAGAATTGATGAAGAAACTCAGATGAAATTTACTGCATCTCTTCTGGAGGCCATTGCTTCCGCATGTTAATGACATTGATTGAAATGTT TAGAAGCATCTGTCATGTGGTTGTGCATGTAAATCACTTGTCTCAATATCATTGCAATTGTAAAACAATTTATGAATGAACTTTGAAAAATGTTTTCCTT GTTTTATTGGTAAGATTAGAGAGTTCTCTTCACCATTCATGACAAGTCATTGGTGTATAATGTGTGGATATGTCTTACATTCTTCATAATAAGTTTGCTA GTAATTACTGAAAATCAGTAACATACTATCATTGTTAGAGATTATGGTTTCAAAATTCTCGAAACAACTTATCTGCTTTTAGGGTAATGCTACCTACATC TATCATTCTCACAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161173; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364412
| Blastp | Pyrrolidone-carboxylate peptidase from Pyrococcus with 31.72% of identity |
|---|---|
| Blastx | Pyrrolidone-carboxylate peptidase from Thermococcus with 29.51% of identity |
| Eggnog | Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity)(COG2039) |
| Kegg | Link to kegg annotations (PF1299) |
| CantataDB | Link to cantataDB annotations (CNT0001358) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423582.1) |
| Pfam | Pyroglutamyl peptidase (PF01470.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |