| Id Trinity | TRINITY_DN48453_c4_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_364427 |
| Sequence | ATTTGTATGTGTGTGGCTTATGCTTTTGCATTACAAGTGATTTGAAACAAGGAAAATGGAAAAAACAAAGTTGAACTTCAAAGACAAAAGATGGTCGCTG CATGGGATGACAGCTCTAGTAACAGGAGGAACTAGAGGCATTGGTCATGCAATTGTGGAAGAGTTAGCGGAATTTGGAGCATCTGTTCATATATGTGCAC GTAACCAAACAGATATTGATAAATGTTTGGAAGAGTGGAAAGACAAAGGATTTAACGTTACAGGATCAGTATGTGATGTTCTCTACAGTCACCAACGTCA AAGTTTAATGGAAACTGTTGCTTCCATCTTTCATGGAAAGCTTAACATTCTAGTAAATAATGCAGGTATAGTGATACCTAAGAGCATCCTAGATCATAGT GGTGATGATATAGCAACAATAATGGGTTTCAAAGCTATTCCTCATCTCTCTCTTTATGCTGCCTCTAAAGGAGCCATGAATCAATTTACCAAGAATTTGG CTTTGGAATGGTCAAAGGATAACATTCGTACAAATACTGTAGCACCCGGTTATGTTAAGACTTTCCTTTTGGACAATTTGCTGGTATGCATTGTTTCATT TAAGTTTATCAAGATTAAATGATTGCAAAAATAAAATTAATTTTTAATCAAATAATTTATATATTATTTTATAATTATAATTTGTCTATTTTATTATTAC TTTATAAAATTTATTATCAATTTAATAATTATTTTATATATATTGATTATTGTAAAATATATTGATTATTGTAAAATATATTAATATATATTTAAATTTA AAAACTTGTTGGGTATTTGCGAAAATCCGCTATCGATGTGGGCATTTGTAAATATTATGAATATGTATACAGGAAAGTAACACTCATACCTGTTCTGTCT CATTGTCATCCCTAATCAACACAGGCATGTCAACATTGAATTTCATTCCTCATTTTCATTGTTAAACTAGTTGTATCTAACTAAGTCCCAACCTAGCCAA AGTCACCTGAAAAAGAGGTAATTATGCCCAACTAAACTAAAATGGATTACTTCCCCTTAGAGTCCCATGAAAAAACATTAACACGTGTTAAGTATTTTAT ATCCTATGTTATTAATTTTTACAATTATGCTCATAATTTATGTTATGAGTACTTCTCTTGTGTTATAGAACTCTACTGAAGGACATGGCCTTCTGGATGA TTTGAAGACTCGAACACATGTTGATCATATTGGAGAACCAAAAGAGATATCTTCATTGGTTGCTTTTCTTTGCCTTCCTGCTGCATCATACATCACTGGA CAAATTATAACTGCAGATGGGGGTTTCACAATTTAAATTGTTTTGTTAATTTAATATTGGACACATATTATTAACAATTTTTCATTTGATTGTTTAGTTT GCATCATTGGCACAAATAACTGAGATTCCAAAACAAAGTGCTCATGAATTGCAAAACTTCCACCATGTGAGAGGACAAAAATGGTGCCAATTTGTGATCA CAAATATTTGCAATAATAATATTTTATCCATTATAGATGTTTGTGCAAGGTCTTGATATGTGATATTGGTACCAACAACATAACAAGTGTTGAATCCAAT GAACTTTAATTTGGCAGAAGGCTGCATGTACAGCATATTCAATAGATATGTCATAGGAGGGTAAGGCAAAGCAGTATAATAAAGTATGGGTGGTGTGGAC ACTTGGCAATGATAATAAGCTCATACCTCACAGACATGTGTGCAACACATTGTTAACATGTTTAATGTTATTCCCATGCAAATTTTGAACCGAGTAGAAC ATAATTCTTGGTGACTTTAGATTATGTTATAACTGATTTGTAGAATAAGTATCATGTAGAGATAAATATTTGTTTGTCTTCATGTTTTTTATGATAAAAA TGTAATTTCATGATAAATAAAATAATAAATGTGTTATTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161175; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364427
| Blastp | Tropinone reductase homolog from Datura with 49.51% of identity |
|---|---|
| Blastx | Tropinone reductase homolog from Datura with 51.27% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450253.1) |
| Pfam | short chain dehydrogenase (PF00106.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |