Id Trinity | TRINITY_DN48464_c0_g4_i1 |
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Name Transcript | Ll_transcript_363493 |
Sequence | ATTTTTACTAACTTAGCAAAATATCAAAGGTAGCATATTTTATTATTTTGTTTTCAGTGTCTTTATGGTAGCAGTTTTCTGTTTATTGTAGGAATTAAAG CAATATCCCACCTTGAGAGTAGAACTTGGAAGTGCGGCTGTTGAATCATTGGAGAGGATGAGAGAAGAAAGTAAGAAAGCAACTCTGCTGTTGGTAGACA TGGAAAGTGGTTATTTGACCATTGAATTTTTTCGTAAGCTTCCTCAAGATGCAGAGAAGGGTGGAAATCCAACTCACTCACTATTTGACAGATATAATGA TGCTTATCTTCGTCGAATTGCTACAACGGTCTTGTCCTATGTGAACATGGTATGCGGGGGGCTGAGGCATACTATTCCCAAATCCGTAGTTTATTGCCAA GTGCGCGAGGCTAAGCGCAGCCTACTTGATCATTTCTTTGCAGAGTTGGGGAAAAAAGAGGGAAATCAACTAGCTTCGTTGCTGAATGAGGATCCAGCAA TCATGCAGCGCCGGACCAACCTTTCGAAGAGGCTAGAGCTGTACAGAAGTGCACAATCAGACATTGAGGCAGTTGCATGGGATAAGTAGAAAGCATTGGT GCTATCTCTTGGAATTTGAATTTTAGTTTTTACTATCTAGTTAATAAAGTAATACATCATTATTCACATGTGTACTCACTCTATTTTATGTGGAAGGGAG AGAGAGGGATTTGATATCTTTTTAAAAGTTGGATGAATAAATGGGATGAACAAAATCCTGTGAAAGATTGAATGGATTTCATGTAATAATAAATTGTGGA GCTAGCGTTTATGAAGGCAT BLAST |
Tissue | pods |
Gene name | LI_gene_161276; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_363493
Blastp | Dynamin-related protein 1B from Arabidopsis with 80.42% of identity |
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Blastx | Dynamin-related protein 1B from Arabidopsis with 80% of identity |
Eggnog | Dynamin family(COG0699) |
Kegg | Link to kegg annotations (AT3G61760) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454615.1) |
Pfam | Dynamin GTPase effector domain (PF02212.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |