Ll_transcript_364079

• Id Trinity: TRINITY_DN48465_c2_g4_i7
• Name Transcript: Ll_transcript_364079
• Sequence: GTGTGCAAAAAAAGATCACAACCATTGATTTCAAGCATGTGAAAATCCTATAAAGGACATGACATTGTTCATTAGGAATATCAGTTGATAGAGAATGGCC AATAATTTGATCATTTCAGAGGAGAAATCACTGCCTAGGAGCATCCAAGAAATGTCCATAGATGGTGATGAACCACCACAACAATTTATAGTCAACAGAA ATAGCATTTGGTCTAAAGATACTTCAACAAATATTCAAATACCCATCATTGATCTAAGTCTTCTCTTATCATCAGAAGCTGAGCTAGACAAGTTAAGATC TGCTCTAAGCTCTGTTGGGTGCTTCCAGGCAATTGGTCATGGAATGTCAAGTTCATATCTTGAGAAAGTACGCCAAGTTGCAAAACAATTTTTTACACTG CCAGTTGAGGAGAAACAAAAGTATGCTAGACCTGTTGGTGAATCTGAAGGCTATGGGAGTGACAGGATAGTCTCCGAGAAGCAAGTACTTGACTGGTCCT ATCGCCTAAGTCTTCGAGTTTTGCCAACAGAAAAACGACGCCTTTCTCTTTGGCCGAAAAATCCTTCTGATTTTAGTGATACATTAGAGGAGTTTACGAC GAAAGTGAAGTCGATGATGGATTATCTTTCGAGAAGCATGGCGCGGTCACTGAATTTGGAAGAGGATAGATCAGGAATCACGGTTCTATTGCAAGACACT GAAGTGGAAGGTCTTCAAATTCTGGTTGATGACACATGGGTCAATGTTCCTACAATTCATGATGCTCTTGTTGTCAATCTTGGTGATCAAATGCAGGTAC ACAAGTCTCTTTCTCAACTATGTTTGATACATACACGTCACAATCGAGTCAGAATCCTCTTCGGTAGTGTTGTGAAAAAAACAAAAACAAAATGTAATGA CACTTATGTTTTTTTGTTTATGGCACTTTTACCCTTAAAACTAAAAGCAAAATCAACATTTCACTCTCCTGAAAGGATTCTGACTCATCACAATCATCTT CATCTCTACATGTTAACTTTAACAAAGGTCTCATAACAATAAATAGTAGTCAAACTCGATCCGGACGTTAAACCGAAAGTCTCGTATTAGGTTCAAGCGA TTAAACTGTCTGGTCTGATCGGGTAATTTAATACATAATTAATATTTTTTATCTATAAATATATAATTATGTATAAGTGTGAAATTTTATATAATTAATA ATTATATTGAATTATTAGAGCAATCTTCATTTTTTAATTTTTAAGTGAACAGTCTATTTTAGTTCCTGTGTTAATCTGGTTTAACCGGGTTTAGCACGGT CGAATCGTTATTTTCCCGATTCATAGCGGTCTAACTTTCACTTGTTTAAGTCGGTAAATCGAAGTTGTTTTTCAGTCCGGCCAGCGGTCAAACCGGTTGG ACCGTCTAGTACGGTCCGGTTCAAATAACACTCATAAATAGCATGTTGGGATGAAACCAAATTGAAGCCTTTTCTCTACAGAAAAAGTACATTTTAACCA AATAAAAATAGTAAAATGGTGTCTGGGTTACATGTTTCCTTATTCAATTTGGATTACATTTTGCTAATTATTTTTTGGTTGATGTATATATGAATGTCCT TTGCTATTATACAGATAATGAGTAATGGAATATTCAAGAGTCCAATGCACAGGGTTGTGACAAACACAGAAAAGTTGAGGATGTCTGTGGCAATGTTTAA TGAGCCAGAACCAGAGAATGAAATTGGACCTGTGGAAGGCCTAATAGATGAGACAAGACCAAGGTTGTACAGAAATATTAAGAATTATGGTGATATGTGC TACCAAGAGGGTAAGATAACACTTGGGATGATAAGAATTGAAGATAACTCTGATAAAAAATGAGACAATTTAATTTCATATTTCATTCCTCAATGATAAT GAAGATATACTATGTAGTTGGAATAAACATGTTTACTAGTTGGAATAAATATGTATGTCCTCGCTTTATTTGCTCCTAATAATCCATGTTTTTTGGTATT TACGTCTCAAATGCTCATAACATGAACTTAGAAATCATATTGGTCTTCCTTGCCATGATGAATGG
• Tissue: pods
• Gene name: LI_gene_161282;
• Additional information: details;

Expression of Ll_transcript_364079

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 1.3
• PS2: 0.2
• PS3: 0.9
• PW1: 0.7
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_364079

• Blastp: Protein SRG1 from Arabidopsis with 33.72% of identity
• Blastx: Protein SRG1 from Arabidopsis with 32.56% of identity
• Eggnog: 2OGFe(II) oxygenase(COG3491)
• Kegg: Link to kegg annotations (AT1G17020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452954.1)
• Pfam: non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;