| Id Trinity | TRINITY_DN48473_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_362406 |
| Sequence | TTTGCCACAAACAACATTAACAACGTTTTTATTCATCCTCCTCTTTGCATCTCTCCACGCAACCTTCTCAGGTTTTCCTCTTTCTCCAAAAATAATTTAT GCCCATAATCAAAGTTTTCATTTTTAAGATACCCTTTACTTCAAAGTTTTGTTTTTTAATCGCATCATGTAGGTTGGCTTTGTTTTTCATAATTATATGT TTTGCTGATTTAATTTGATAACTCTCATGTTCATGATTAGATTAATACAAATAGTAATGAATTAATGATTTATAGCTTATTAGTTGCGTTTGTTTTATGC ATTTAGTTAGTTCCGTGATTCACTCTCTCTGGATTTTTAGTATAGATCTGTTATTTAATTCCAAATAACTTTATTGGAACCAAGAACCAATAACTTTGAA ATATTTTGTGTAGAACTAGAAATTCAAATTACCCTTCTTTCAGTTTCATTTATGATGTTGGTTTTCATGCACATGGAAATTCGTATTAGGTATAAATATG TGCTTGGGGTTTTCTGTAAAAAAAACTAACAACTCGGTCCTTGAAGATTACTAATGTTGGAGACTTTAAATCGTTTTTAGGGATAGGATTAGTTCCTAAG AAAGTGAAGTGTGAACTAATCAGGTCCCTAATTCCTAAAGGGACATGATTAGTTTTTGTACCAAAACTTAACTCATATTTTGGCCCTGACTCAGTTAAGT GCACATTTCGATCTGCGCTTGACGACGCACATAACGTGAAAGCCTGCATGAGTAGCTTCTTGCAAATATGCATTCGACCATGACGGGACGCAGAAACAAA AACATTGTCTTTCATTGTTTTTTCCTTTTGTTGCCTGTTCAAGTGATTTTGCACTTAAATTCTTAAAGCAGTGTTATTATGACTATATTAGCTTATGGTA GCAAGAGTAGTTGTTATTGTTTGTGTTTTTCATTTTATTTCCTTTTTGTTATGTTGGTTAAAATGCAGATTGTTAATTGGATCTTCATGAGTTCAACAAC CACTGGAGCACACTTGGTTTCCTGTGATTCGGGAAACAAGAACAACAACCTCTTCTGCTGGATTTTGCTGTGCTTGCTGCCAAAATTCTTGGGAACTCCA TTTGCATACATCAACTTTCTCCTAACTCATGCCATTGATATGAGTCCTTCAGCAGTGGGGGTCTTTGGGAACTTCGGCTTGCTTAACCTATAGTCTTTAT TTAGTTTGGCGATCAGCATACTTAAATCTCGTTATTGAGTGGTGAAAGACATGGTTTCCTCTAGCTTTTCCGGTTTGACATCGGCTCACATAAACAAACC ATTAAAGAATCAGTTACTCCTTCCTGATAGCCTTCCTAATACCATTGACACGGATAATATTGAGCTAGATTTTTCGGATGTCTTTGGTCCTGTTACTGTT CCAACCTCGGTAGAAGTGGATAACATTGACTCCTTTGCTGCTGAGTCTGTAGAAGAATCGAATGAATTGGTTTATGATGACCCCGAAGTCATTTACACTC GCTCACATTCTCTCGTTGGTCCTTCTACTTGTATTAGTCAATCGTTGAAGCTCAGCAAACTCACCATACATGAGAGTAAGGAATCATTTGAACTAGTGGA GCATGTGACCAGAGAGACCATTGACGAACTCCAAGAATCTTCCTTTAAAAATGGGATTGTTGAGAAATCTTTGAATGGCGATGATGGGAATATCATGAAG ATTCCGAAAGTTAGCATTGAAGATTTTGATATTTTGAAGGTTGTGGGGCAGGGTGCATTTGCTAAAGTATACCAGGTGAGGAAAAAGGGTACTTCTCAGA TATATGCTATGAAGGTTATGCGGAAGGACAAAATTATGGAGAAGAACCATGCTGAGTACATGAAAGCCGAGAGGGATATTTTGACCAAAATAGAGCATCC ATATGTCGTTCAACTCAGATACTCTTTTCAGACAAAATACCGATTGTATCTTGTGCTGGATTTCGTAAATGGGGGTCATCTCTTCTTTCAGCTTTATCAC CAGGGCCTTTTCAGAGAGGATCTAGCACGTATATATGCTGCCGAGATTGTTTCTGCAGTTTCCCATCTCCATTCGAATGGGATTATGCACAGGGATCTGA AACCCGAAAATATCCTAATGGATGCTGATGGCCATGTTATGTTAACCGATTTTGGTTTAGCCAAACGATTTGAAGAGAGTACAAGATCTAATTCCATGTG TGGAACAGTGGAGTACATGGCACCTGAAATTATTCTCGGCAAGGGCCACGATAAGGCTGCTGATTGGTGGAGTGTGGGCATCCTTTTGTTTGAGATGCTT ACTGGAAAGGTTTGCATTTATTTTCTTGGAAATTGTTTCCGGGACACATTTTGTTGTGCTGTATGCTTGTAAGTTGAAATGACTTGTAACTGAAAAACTT GTATCTCCTTTTGGAGTCTCTAAATGATTGCTTTTGTTATTTCACTCCTCTGCAGCCGCCATTCTTTGGTGGGAATCGTGAGAAAATTCAGCAGAAGATA GTTAAAGACAGGATAAAGCTGCCGGCATTTTTGTCTAGCGAAGCACATTCTCTCTTGAAAGGGGTAAGAACTAGTTCACAAAAAAGAAATCTTTCGATTC CTTAGTTTACCTTTGATCTTGAACTTTCCTGCTATTTGTATTGCTGGTTAGCCGAAGTTAGATAAAACTATTGCTCTCTCTATTGCAGCTGCTACAGAAG GAGGCGTGTAAGCGGTTAGGTAGCGGAACTAAGGGGATTGAGGAAATCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161359; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362406
| Blastp | Serine/threonine-protein kinase AtPK2/AtPK19 from Arabidopsis with 65.85% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase AtPK2/AtPK19 from Arabidopsis with 65.85% of identity |
| Eggnog | protein serine/threonine kinase activity(ENOG410XNPH) |
| Kegg | Link to kegg annotations (AT3G08720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413764.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |