Ll_transcript_362393

• Id Trinity: TRINITY_DN48473_c1_g1_i2
• Name Transcript: Ll_transcript_362393
• Sequence: TATTGGAGAATGACATCACAAGCACATGAAGAAATACACCTAAGTTTTGGTCATCAAAATTTATCTTGAATTGCTGAAAATTTTTGGTTCCTCATAAAAT ATGTCAATTCCTTGATTCACATTTGATCTTGAACTTTCCTATTATATTGTATTGCTAGATAACAGAAGTTAAATAAAGTTTTTTTGGCTATTACAGCTGC TACAGAAGGAGGCAAGTAAGCGGTTAGGTAGCGGAGCTAAGGGGATTGAGGAAATCAAAGGCCACAAGTGGTTCAAACCAATAAACTGGAAGAAGTTGGA TGCAAGAGAAATCCAACCAAGCTTTAAGCCTGAAGTTGCTGGTATGCAGTGTGTTGCTAACTTTGATAAGCGTTGGACTGATATGCCGGTGGTGGACTCA CCGGCTGCTAGTCCAAATGGTGGAAACCCCTTCAAAGACTTCTCATATGTCAGACCTGCAGCCTCTTTTCTTCAAAGGAGTAGCCCTGCTTGTTAGCAGG CCTTTGCATTGCCTAAAGGAATAAACATCACCTGTATCATTCTTGTGCCACTTCTTTGTATCAGGTGAGAAATTATTGAGTTATTAGATATCTAAACCAA AATTTATTTTCTTGACCAGTCAGAGGGAGTGGCATAGAACAGAAGTAACATAGAAAGTGAAGCATATGACATAGGGAAGTAGCACAAAAAGTGGTACATG TGATGTTATCTGATGCAGATGTTTCCACAATACTGTTTTTCTTTCAGGAGCTCTTATTTAGATATGCTTCATCACTGGTACACTGTCCTAGTTTTTTTTG GTATAACCAAAGATACACTGTCGTAGTTGTTAGCAATAAACATTTTCTTGTGCCTGTAGTTGTGTGAACTTGGTAATTTATGAGTTCATGTGCCTTGCTG CTCTACAATTGCGTTGAGCTGACTTGCTAGAATTACTGATGCAAATAAATTGCTTTATTTAATACTAAGTTTTATGTACTGAACATTTTGTTTCCTTCCT TTGCCGTTGGTTCTGTGCTTTATATTTTCCTGCTAGGGAATGCAAATTGTAATGGATTACTGAGAATGAATGCAAATTGTCTAATAAGTGTGGGTACAAA CTTGGAGTTTATACACTCTTCCCTTCAATGCCATTGAAAAAAATGTTAAGTCTTTATTTGAAGTGTTACTGTATCACATTTTTTGTTAATAGATTAAGAA CCATTATACTTAACACTTACAATGCTTCCTTAATTATTTTACAATATGGCACATGATACAAATGTGTATACGTATATTCTTAGTGTGAGTATTGTGGCAA GCTTATATAGGAGCTTGCATGAATAATTACACTTTTGGCATGATATGTTGAATCCCTTATTTATCCATGCATGTTTACATGTGGTGTTTAGAGTTCATCA TGGTAGAGTGTTTTCTCCAACATATTCTTTTTCTTACAACTCCAATTGCACTTGGAAGAGCACAAGGAGTTGAATAATTTCATCCTCTTGGATTGAAGGG ACACAATACTTGAGGTTGAAGTAGATTTTGAGAAAACAATTGCATAGCCATCATCCATGTTATCTGTTCCATCAGGAAACACCTGCCACAAGAGGCTTCC AGCACCACTCCCTCCTTTCCTTGTAGAGTTCAAGGTTGTGTTGTACACAGTGCTTATAAGTGTGTCTCTATATGATGAATTGTATCCAGGATCTTTTGAA GAAACACCAAACTCAGTCAAAAGAACTGGCATATTAAGATGCTGTTCAGCATCCTCTATGTGTGCTTCCATCCATGATTTTACAAATGGGAGATGTGTAT CAGAAATTTGTTGTGAAATCCTTCAATATGGGTAATAGATTGAGTTAGAAATTTTTGTGCATTATTAAGGCATGAAAGAGTGCATTTTATGATAGACTCT TAGACAAGTATGCACATGAATACGAATACTATATGATGACCAATTTTTGTGTCATGGCTCTTACATGGGTTGTATAAGTCAATAAGTGTGTTTAGCATTA TTTAAGAGCAAATGCTTATGACAGAATACATTATTAAGAAATATTATAATTTATAACATAGACTAGACAAGTAAGCACATGCATATGAATATGATACTTA TGATAAGGTCACATTTGAAGAAAACAATATCATCATGGACTAAAAGACTTACCAAGAGTCTGCATACATGTGGACAGAAG
• Tissue: pods
• Gene name: LI_gene_161359;
• Additional information: -

Expression of Ll_transcript_362393

FPKM

• PAB: 0.6
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362393

• Blastp: Mannan endo-1,4-beta-mannosidase 6 from Arabidopsis with 62.79% of identity
• Blastx: Serine/threonine-protein kinase AtPK2/AtPK19 from Arabidopsis with 68.69% of identity
• Eggnog: Mannan endo-1,4-beta-mannosidase(COG3934)
• Kegg: Link to kegg annotations (AT5G01930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450400.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;