Id Trinity | TRINITY_DN48474_c3_g1_i2 |
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Name Transcript | Ll_transcript_363535 |
Sequence | TACTATTTCTCTTCCTAACACTCTTTCTTCTTCATTCTCTCTCTCTCTCTCTCTCTTATTTCTTTGTTTCTCTGTTTTTGTTCTGAACCCAAAGAGAGAG AGAAAAGATGGAGCTTGAAGGTTTATGTGTTGTGTGGCAAGGTGCTATTTTGGGAGGAATACTCTTTTGGATTTTCTCTTCATCACATCTCAATCTCACT CAAAAGCTTAGATCTTTTCTACAACCATGGGTCACTCATCATGTTCAAACCACAACTCATATGGTTCTTCTCATCCAGAGTTACCAACATGGATTTCTGG ATGCTCTTTTCTCTGGGTTGTCATGTGTTGTTTCTGTGCCCTTTTACACTGCTTTCCTCCCTCTGCTATTCTGGAGTGGTCATGGCCAATTGGCAAGGCA GATGACATTGTTGATGGCGTTTTGTGATTATACTGGGAACTGCATAAAGGATGTGGTTTCAGCTCCGAGACCTCCCTCTCCGCCTGTTAGGAGAGTAGCC ACGACAAAAGACGAAGAAGATAATGCCTTAGAATATGGACTGCCTTCTTCTCATACTCTCAACACAGTTTGCTTATCTGGCTATCTTTTGCACTATGTGC TGATTCATACTCAAATTCAAGGGCCCTATGTTAATTACCTTGGAGTTTCCCTTGTTTGCTTGTTCATAGCCCTCATTGGCTTAGGAAGAATTTATCTTGG CATGCACAGCTTGGTTGATATTCTTGCTGGCCTTGTTCTTGGACTCGGGATCCTCGCATTTTGGCTTGTAGTTGATGAGCACATAGACAGTTTTGTGACC TCAGGACAAAATGTTACGTCTTTCTGGGTTGCGCTGAGCTTCCTCTTGCTTTTTGCTTACCCAACTCCCGAACTTCCAACTCCAAGCTTCGAATATCACA CTGCTTTCAATGGTGTTGCATTGGGAATTGTAAGCAGTTTCTCATCCTTTAACATCATCGAAACTTGTTTCATCTTTCGTCTTTCATATTATGAGCGAAT ACACACAAGATTACATAATTTCTTCTTCATATAGTTTAGAAATAATGCGCGAGAACAGAACATAGGAATATAACACTCGGGTAGAATCATAGACCAAAAG ATAAGGTTTTGGCTCTTGAGGTGCTTTAGGTAATTGCAACTTATTAGCTTTAAGCACCTTTCGGATATTGGGGACTCCACATCAGAATTTAGATTCTGAA TGTTGCTTGGGCTAGATCTAAGTCAGCTTCAACAGTGACTTCACTGATAGTTTTGTACCTATTGCATGGAGTGCTAATGTTTCAGGTGAATATGCTGAAC ACAAATTTATCTAGTGCAACTGTAGATTAGACACATCAAATGTCTAACATCAGCTATAAAAACGATCCGTATTAATTACAGTTTGATATGCTCATTGGTA AATATCAAGCCAAGTTAAAAATGATCCCTAACCTAAAAATGTTGCAAGTTTGGAATGCAACAATTTTAAGTAGAATCAAGTACTCCCCTTGGATTTCTTT GGTAGTCCACCAATACTAACTGAACATGCCAAGGCCTGGAACCCTCCATTCTAAGTTTTTTGGATTTTCAAATTGTTAGTCCTTTTTTTTACTCATAGGA ATTTTTAGGTTAGGGAGAACTGCAATGAAGATTTAGTATGAGCCATTTTTGAATTAGATCCCTATATTTTTTCCTTACTTTTGGATATTTTGAATTGAAC ACCAGTGTGATTGGAAATTTTAGTGGTGTAATGCACCATGTATATGAGGATAAGCTCGACGAGAAAGTAAGGTTGTTGCTTCCTAACCTTGAGGTCATGA TTTTAAATTCTGGAAACAATCTTTGTTGACGGGGTAAGGCTGCGAGTTACTATCTGTTGATTCTTCCTGGTGGAAGCCTTGTGCACCAGACTTCCCTTTA AATCTTGCAAATAGCATTATGCTATTGTTCCGTCCTAGTAACAAGACTAGTCAACACTAGGCTGTCATTGGGAATAGAACGAAGATCCGGTCATTTATGA CTTTCGATTGTCGGGACTATGGGAAAGTATCATAGTGATAGATCAGGACAAGTCAACGCCTGCTACGGTGGAAAACATTCATTCACGCCAAAGGCAAGAC GATGATGCTACCTAAGCAAAGGACATGTTCGTGACATTTCCCACACAACAGAGGTAATCCAACTCCACGACATTGTCAGATTGATAGGCTTAAAAGAACA AGCTCCCCCTGGACTGCATATCACTCCATCCCACAATATAAATAGGTGAATCCACCCCTTAGGAGATGACATGTGTAGACTTCTCACTCTACTTTCTCTT TAACGTACACCTATAAATATTGACTTGAGCGTCAGAGTCCCTTTTCAGGTACCCTCCTAAGGCGTTCCAAGGTCGGCAACCGCCCAATTCAGAAAATTGC CTACATTCCGTCAACCCTCTTCTAACATTGAAGAATAGCTATATAAGTCTATTTCTAGGATTCAAACCCATGACCTTTACTATTGCATCGGGACTCGCCC TCTAATACAATCACATTGTTGCAGGAAAAAATGATTTGATTGCTGTTTCTGCTATATGCATTGATTTAAATTGCTCATATTGTTCAGGTGGCTGGGGTAC AGCAAACATACCATCAATTTCACCACGGCGCAGTTCCTCATTTGTTCTCTGAAAACCTGACATTACCTGTATTTGTGGGAAGAGTGATGTTGGGAATACC AACAATTTTGATAGTGAAATTCTGCAGCAAGACTCTAGCAAAATGGATAATCCCAGTGGTAGCGAACACGATGGGCATACCAATAAAATCAAGCAGCTAC ATAAAATCAGATAAGCAAATTAAACAAGGGGGTTACTTGCTATCAAAGCATGGGGTATTTGATGTTGATACTGGGATTAGATTTGTTCAATATGCAGGTC TTGCCTGGTCTGTGGTGGACCTTGTTCCATCTCTATTTACATACACCAACTTGTGATCTTATATTTAGATATAAGACCCAATTTTGTACAGCAAGAGATC GTTGCCATTTGGTCGGTCAAATTATAGTTTATCAGTATATATTATCAACAACATATTCATTTTCTTCGTGGTAGGATTCTGAAATTAGTCAATCATATGT ATAAAAATTCAAGGTTTATAATAGTATATGAACATGTTATGAAGTGGTATATAATATGACAAGTCATTTTCATAAAGGACATTGTCAACTTGCTATTTGC TGTACTTTTTATTTTATACATCAAATAAGAAAAC BLAST |
Tissue | pods |
Gene name | LI_gene_161368; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_363535
Blastp | Lipid phosphate phosphatase delta from Arabidopsis with 70.04% of identity |
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Blastx | Lipid phosphate phosphatase delta from Arabidopsis with 68.1% of identity |
Eggnog | PHOsphatase(COG0671) |
Kegg | Link to kegg annotations (AT3G58490) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444139.1) |
Pfam | PAP2 superfamily (PF01569.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |