| Id Trinity | TRINITY_DN48476_c2_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_361844 |
| Sequence | CAAATATATAAACATCGCTGGCTTTCTGCAAAAGCAACTATTTTAAAATTTTGCATCAAAAGGAAGATTAACATAAGAAGCATAGCATCATAATCTTGTG TTTTTGTTATTGTGTGATATCATAGAATGTCAGGTATGGAGAGACTTCAAAGAATGTTCGCAGGTGCAGGTGGAGCCCTGGGTCACCCACCACCTGATTC CCCCACCCTCGATTCATCAGAGCAAGTCTACATCTCTTCCCTCGCACTTCTCAAAATGCTCAAACACGGGAGAGCTGGTGTTCCCATGGAGGTGATGGGA TTGATGTTGGGGGAGTTTGTGGATGAATATACTGTTCGTGTAGTCGATGTCTTTGCAATGCCGCAGAGTGGAACTGGTGTTAGTGTTGAAGCTGTTGATC ATGTGTTTCAGACCAATATGCTTGATATGTTGAAACAGACTGGAAGACCAGAGATGGTTGTAGGTTGGTATCATTCTCATCCTGGATTTGGTTGTTGGCT TTCTGGAGTGGACATAAATACACAACAGAGTTTTGAGGCTTTAAATCAAAGGGCAGTGGCTGTGGTGGTGGATCCTATTCAGAGTGTTAAAGGCAAGGTG GTGATTGATGCTTTCCGGCTGATTAATCCACAAACTATGATGCTCGGTCAGGAACCACGTCAGACAACCTCCAACCTGGGCCATCTGAATAAGCCATCTA TCCAAGCTCTAATCCATGGCTTAAATCGGCATTATTACTCCATAGCAATTAATTACCGGAAGAACGAGCTGGAGGAGAAGATGTTGCTTAACCTTCATAA GAAGAAATGGACCGATGGTTTGACACTCAGGCGTTTTGACTCACATTCTAAAACTAATGAACAGACTGTTCAAGTAAGTTAAGATTCTTTTATATAAATA CAGATCATTTTACCAATTTGCTTTAACATTTTTACTTCCTTTGAGCTTTTCTTTTCGAATCTGTTGTATGCATGAATAATATATATGCTTTCTGATCCAA TATGTATCTCAGTAATGGTTCCTTCACATTCCTTGTGATGGGTATAGACCTATCAATTAATAGAATCACCATAAAAACTTAAGCAAGTGCAAATCTGAAA GTAATTGTTTGTTTGAATGTGCATATTCTACATGCACGGTACTCGAATGAGATCATCTTTCATGTTTCCTTTTCTCTTTTTATTTACGGTGATTCAGGAA ATGCTAAATTTAGCCACCAAGTACAACAAAGCAGTGCAGGAGGAAGATGAGTTGCCACCGGAAAAGCTTGCAATTGCTAATGTGGGAAGACAGGATGCTA AGAAACACCTTGAAGAGCATGTTTCCAATTTGATGTCTTCAAACATTGTTCAGACTTTGGGCATGATGCTTGACACAGTTGTGTTTTAGAGTTAGTGTTA TCCACTGTAATCTTGTTCATCACGTCTAGCTATACTTCATTAGCACTTTTGTCTTGTTAACATTAACTGCTATTGTTATCGTTTTTGCTTTCATAATGTG TTTGTTTCTAATGGTGGAATAACTTGCACGTTTCATTAGGAGAATGATATTTTAAGATCTATAAATGTTATGGAGTCACTCATTATGTTGCTGTAGGTTT TTGCGATAATTGCTATGGGTGAAAATTGAAAGTTGATACATGGATCCTTTGAAATCTTCACATGGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161385; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361844
| Blastp | 26S proteasome non-ATPase regulatory subunit 14 homolog from Arabidopsis with 96.34% of identity |
|---|---|
| Blastx | 26S proteasome non-ATPase regulatory subunit 14 homolog from Arabidopsis with 95.53% of identity |
| Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310) |
| Kegg | Link to kegg annotations (AT5G23540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443141.1) |
| Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (PF01398.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |