Ll_transcript_361845

• Id Trinity: TRINITY_DN48476_c2_g3_i5
• Name Transcript: Ll_transcript_361845
• Sequence: ATTTGAATTTATTCTTACCCTTGTTGAATTGTATATGTGAGTTTTAATTTTTTCGAATTTTTTTGGTTGTCTATTTCCTTTCTCTTGGAAAACATTAAAA GCCCCACAATTTAGTTAATGAGAAATGAAAAATCTTAAATTCTTAATTTAGTACCTTAGAATCTTGTGTGACGGTAAAAAAGGCCGTAAAATTTGTCCTT AAGAGGAATAATCTGACCGGCATCTGTGGTTCTTGAGAACCAAATTGGATTTTACATTTCTAGAAAATAGAAACTAAATTGGGAAAAACACTTTTTTGTA AGGGATGAATTTGGGTATTTACTCAAACATTAATTACTGGCAGTGTCTTCAGTCTCTTTTTTTGGTTTCTAGATGAGAACTCTTGTTTTCATTGTTAACA CCTCCCCTTTGCTTCTCCCCTGGATTCTTAGGGTACATATTTCCTTTCTTTGAATTGAATTAACTTTGTATTTCTAAGAAATAAGGGAAGACCAATTATG ATTGAGTTTCAATGTTGGTTCTCTCATTTGCTTCATACCACACTGCTAAACTCTTCAGTGAGATTAATTCATTTATCATTGGATGATTCATTGGACAACA ATGTCCTGGTGGATAAAGATTGTAGTTGTTGGTGATTGTGGTGAATAATATATGGTATTTAGCCTATGCAAAGAAACATAACGCCTTAAATCAACTGTAA CATGTGGAGTTATGTACTTTAGGATAAGTATATGCAGTTTTAAATTTTGGGTGCAATGTTTTCTGTAGATATTCTTAGATGAAGTGGCTTCCTCTTCTGT TTTAACAGCATTTATATGGGTTAAAGACTCACAAGTGTGTGTGCGGAATCCTGAATATGGATAAGTATGGGGTGCTTTATTTAATGAAATTTTTAATGCA TTAGTCTTAGCTGCCACACTTTTATCAGCACAGCTTCCATTTTGAACATTTATAATTGTACAAGCGGTTATTGTTTGTTACTCTGTGCTTTATAGTTCAT ACTTGTATCCCATGAACAATGCCTGGTTCAATTTCACATCAGTTTGTTAAAACTTTGAAATTGTTTCAGACCAGAGATGGTTGTAGGTTGGTATCATTCT CATCCTGGATTTGGTTGTTGGCTTTCTGGAGTGGACATAAATACACAACAGAGTTTTGAGGCTTTAAATCAAAGGGCAGTGGCTGTGGTGGTGGATCCTA TTCAGAGTGTTAAAGGCAAGGTGGTGATTGATGCTTTCCGGCTGATTAATCCACAAACTATGATGCTCGGTCAGGAACCACGTCAGACAACCTCCAACCT GGGCCATCTGAATAAGCCATCTATCCAAGCTCTAATCCATGGCTTAAATCGGCATTATTACTCCATAGCAATTAATTACCGGAAGAACGAGCTGGAGGAG AAGATGTTGCTTAACCTTCATAAGAAGAAATGGACCGATGGTTTGACACTCAGGCGTTTTGACTCACATTCTAAAACTAATGAACAGACTGTTCAAGTAA GTTAAGATTCTTTTATATAAATACAGATCATTTTACCAATTTGCTTTAACATTTTTACTTCCTTTGAGCTTTTCTTTTCGAATCTGTTGTATGCATGAAT AATATATATGCTTTCTGATCCAATATGTATCTCAGTAATGGTTCCTTCACATTCCTTGTGATGGGTATAGACCTATCAATTAATAGAATCACCATAAAAA CTTAAGCAAGTGCAAATCTGAAAGTAATTGTTTGTTTGAATGTGCATATTCTACATGCACGGTACTCGAATGAGATCATCTTTCATGTTTCCTTTTCTCT TTTTATTTACGGTGATTCAGGAAATGCTAAATTTAGCCACCAAGTACAACAAAGCAGTGCAGGAGGAAGATGAGTTGCCACCGGAAAAGCTTGCAATTGC TAATGTGGGAAGACAGGATGCTAAGAAACACCTTGAAGAGCATGTTTCCAATTTGATGTCTTCAAACATTGTTCAGACTTTGGGCATGATGCTTGACACA GTTGTGTTTTAGAGTTAGTGTTATCCACTGTAATCTTGTTCATCACGTCTAGCTATACTTCATTAGCACTTTTGTCTTGTTAACATTAACTGCTATTGTT ATCGTTTTTGCTTTCATAATGTGTTTGTTTCTAATGGTGGAATAACTTGCACGTTTCATTAGGAGAATGATATTTTAAGATCTATAAATGTTATGGAGTC ACTCATTATGTTGCTGTAGGTTTTTGCGATAATTGCTATGGGTGAAAATTGAAAGTTGATACATGGATCCTTTGAAATCTTCACATGGAC
• Tissue: pods
• Gene name: LI_gene_161385;
• Additional information: details;

Expression of Ll_transcript_361845

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_361845

• Blastp: 26S proteasome non-ATPase regulatory subunit 14 homolog from Arabidopsis with 97.86% of identity
• Blastx: 26S proteasome non-ATPase regulatory subunit 14 homolog from Arabidopsis with 97.9% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310)
• Kegg: Link to kegg annotations (AT5G23540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004517258.1)
• Pfam: JAB1/Mov34/MPN/PAD-1 ubiquitin protease (PF01398.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;