| Id Trinity | TRINITY_DN48476_c3_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_361863 |
| Sequence | TTTTTTGAATTATTATTATTATTGAACCATAACAAAAGAAGCTTCCATTGTTACAATGTCTCAAATCTTGCAACTTTCATTCTCTTCAACTTCAACTGGT CTAAGTTCTTCAGTAAAAATGAAGGGAACAGCAAAAAGGCCTTTCTTCTTTCAAATTCTATGCTCTTCTTCTAAGCATTCAAGTTTCAAAGATGAAGATG ATGATAATGTTAATAAAGGGTTTGATGATGATTCCTTCTTTGCTTATTTTGTTCTTAATATTGTTGAGAAGTAAGTCACGCATTGCATACCCCGTTGTCT CGAGAATGATTTAAATATCCACTCCTCCCATTGCCAATTGGTTTTGAGATGGAACTCTTTCCGGTCATGGGCGAAAAGATGCCATTAGTTATGGGTCAAA TGTAACCCTTCGCTTGGTCTGTTCCGGCAGGTTTATGTGGAGGGGGCATGTTGAGAAGTAAGGCACACATTGCCTACCCATTGTCTCGGGAATTGTTTAA ATAACTGTTGGGCTCCTCCTCTCATTGTTTTGACATGAAACCTTAACAAATATAACTTAATTACATTGAACTCCCTTGACTTAATTGCAATTGACACCCT ATGAGAAAATTTACATAATTTATTTGTTGTAGACAAGAAAAAGAAATAAAAGGGTATGATTATCTGTGGGGAAAAATTGAATTTTTTGTTTCATTTTTTT CCACCAAAAGTTTACTAGTTCATGAAGCTTGAAGTATATAATAAGGTTTAGATAATTTTGATTAAGTTAAGAAAAAATGTGGAATTATGACGGAGGAAAT TGAATGTTTTCATTTGCTGCTACAAAAGTTTACAAGTTGATGAAGCTTTTCAAGAAATTTTTACAATTTATCTGTTGCAGACAAAAAATTATGAATTTTG AAAATGTGTTTAAATAGTTTACTTAAGTAGATCAAACCAAGCTTTGATTTTGTTTGCACTGCAGAAAAGAGCTTCTTCATGGGTTTCTAATACATGCTAA GTAATTTTCTCTTAATTTGTTGTGTTTTTTTAGAGATCGAGGCTTATCCCGGGTGATATTGGTGGAGAGATATAGCAATGGTACTGCTAAGAGGTTTTTT TACTGAACTATATACCATATTGTTGGTTTTATGCCTTCTTGATTTTAACATGGTTGCCTTATTGGAATCAGATATGTTTTTGCATAAGATACTTCTCAAA TACATCTGTATTATTGTTTTGAATTTTGTACAAATACAAGCGAGATAGCACAACTACTAGATCAATGTTAGTATTTTATTGTGTATAATGACTATAGATG ATTTCTGAAATATTCATGACTTGATGTCTTCATTCCAAATTAGGATTTGTGTTTTTATGTCATATCTTAGCCGTGTTGTGTCCTAAAATTTGTCATATCC GCATATAAAGTCACACCGCATCTATATCCTACACCTGTATCTGTGCTTCATAGGCATCAACTATCAAATGGAAATGAACTAGTTATGATCGTCTTTGCTT GTTGTTCGGAAAATCCTAGTAACCTCGTGAACTTTCCATTATTGCCATTTGCTCAAGTACATAAGTTTCACAGTGCCTAAGGCTGCATTTTCCATACCGG TTTCAACTATGACTCAACTTTTCCCCCTTATGAGCAGATATGTAGTAGATGATGATTCACAGCTTCAAACCTTTCTTTTTGAAGAGGATAAGTCTACAAC AAACATGCTCCAGGATTCGCAAAGACTATCCTGGCTACCGGAGATAATCAAAGATTTTATTCTACCAGCAGGCTTTCCTGGATCAGTTTCAGATGATTAC TTGAACTACATGTTATTACAGTTCCCTACCAACGTGACCGGATGGATTTGTCACACCCTCGTCACTTCAAGTCTCCTAAAGGCTGTTGGTGTTGGCTCTT TCTCAGGAAGCACAGCAGCTGCTTCGGCTGCTGCCATAAGGTGTCTCCGTTTTGACTTTTGAGCATACATTTTTCTATATAGAACATTTATATGCGTCTA ATTATCTTACTATATGCAGCTATTTATTTGTTATCTAGACTTTTATGTAGTTGATTGCATGTTTTATGCTTTCATCTTTAGATGGGTCTCAAAGGATGGC ATTGGAGCAGTGGGACGCTTATTCATCGGTCTGTCAATAATTAAAAAAGATAAACGAGGAAAACGATTATGTGCTGAAGATCCGAGTTATTAATTGATCT TTAATTAAGTGTTCCTACATTTTCAGGTGGGCGGTTTGGGAATCTTTTTGATGATGATCCAAAGCAATGGAGAATGTATGCAGACTTTATTGGCAGTGCT GGAAGCATTTTTGACCTGACGACACAATTATACCCGGACTATTTCCTTCCTTTGGCATCTCTTGGAAATCTTACTAAGGCTATAGCAAGAGGACTAAAAG ATCCTTCCTTTCGTGTGATTCAAAACCACTTTGCGCTTTCAGGAAATGTAGGAGATGTAGCAGCAAAGGAAGAAGTTTGGGAAGTGGTTGCTCAACTGGC CGGCCTTGGTTTGGGCATATTGATACTGTTTTCGAGTGCAGGATACACCTGGCCTTGTAAAATCATACCCTGTGCTTCTATCGACTTGGATGAGTATGCG ACTTCTGCACATTTGGTTACGCTATGAATCACTTTCAGTCCTCCAGTTCAACACTATAAATCTTAAGCGTGCTCGCATTCTCGTAAAATCACATGTGTTG CACTCTACTGTTCCAGGATGCAAGGATTGCAACAGGGAAGAAAATATACTAACCTGGCCACAGTTCATGAAACCGGAAATTATTTTTGGCTTGCCTTTGG AGAAGATGAATATAGAGAGATCTCATTTTATGGTGAAGGCATTTCTGAAATTATATGCACATGAAAAATACATTCTTATGGTGAACCAACAGCAACAAGA TTTGAGATTTCATGTTTCTTTCAAGGTTGGAGCAACAAGTGTGTCAGTACTGAGAAGTGTGTGGCAAAGTTTCTGGCTAAGTGAAAACTGGAACAGAGAA GGTAATGTTTGTGATCAACTTGGCAACAGCCTAATGGAATTGGAAAATAAGTTTGAGGATTTCATTCAAAAGTTGAAAGTTGCTGAATGGGATACTCAGA AATTAAATTTGAAGGTTCCTAAAGAAATCTTAATTGATGATATCAATCCTCTCTAACTCCTAACATGTTGGAGCTGAGAATGTTTCACATTTTCATCATT GATATGATCATGCTGTCTTTCAAGACTTGCAAGCATTTCGAACAAGCGGGTAACCTCTACGACTCGATCTCTACCTCCCGAACTCCCTTTGCCACTTCCT GTAATTAGTCGAGAAAATAAAATTTACAACTAAATATTCGTTGGATTTATTTTCTTGACCAATTAGAGCTCGTGGCACATGGAGTCGGCACAAATGAGTA GTATATGCGATCTTATCCCTAGAGCAAGATATGTTTTTCTTGACATGGAGATATTCAACATGTTGGCCAATTGGCTTTACTCTTTAGCTCATTGAATACC ATAGTCTTATTAAGAAGGTTCCTGGTGTAAAGAATCTGTTCTCAATTTTGTTTGAAACATTTAATGTTTGTAACTATTTTGGAGAGAAACTTCATGCTTG CTGTTCAGGACTATGTATACTATACCGTGGACGTCTACCTTGCGATTCTGGCTTCATGCAGGTGAGTTGCAGCCTACAATCCGAACTTAGGATGAGTTTT TGGAGTTAGTTCACCCCTGTGGGATCGCGGTCCTAAACAAGATTGATACCGGATACTCAAATTGATTACCCTCCTAAAAGGATGGTTTGGAAAATAAAGG TACATGGTGTTAATGTCTAACATTAACTTGGAGCACAAGAAATGTCTCAAAGGGACTTTTATTAAATTTTATATAAATCTTAAGTTGATAATTTAAAATC AATGGTAGAGATATACTCAAGAAAATACTTACTCTTCATCTTAGCCATCAATTCTAGAGAAATCCAATGGTTTGAATTAGTGGTAAATCTAAACCAATGG ATTTCCAATAAATTGATGGCTAAGATGAGGAGTAAGTCGTCTAAAAAGACTTACTCTTGGAATAAGTTGATCCCCTCCTGAGAAATATAATCATATTTTC C BLAST |
| Tissue | pods |
| Gene name | LI_gene_161386; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361863
| Blastp | Protein root UVB sensitive 5 from Arabidopsis with 56.15% of identity |
|---|---|
| Blastx | Protein root UVB sensitive 5 from Arabidopsis with 56.44% of identity |
| Eggnog | Chromosome 16 open reading frame 58(ENOG410XU74) |
| Kegg | Link to kegg annotations (AT5G01510) |
| CantataDB | Link to cantataDB annotations (CNT0001676) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004492435.1) |
| Pfam | - |
| Rfam | - |
| GO | - |