| Id Trinity | TRINITY_DN48476_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_361854 |
| Sequence | ATTTTTAGCTTCGGATAGTGTTACTGTGACAAAAGTTGAAGTCTTCAATTACCCATTTGTTGAAGAAGAAGAATAATCAAAGACCCTCTTCAAAGTTTGC ATCTTTTTTGAATTATTATTATTATTGAACCATAACAAAAGAAGCTTCCATTGTTACAATGTCTCAAATCTTGCAACTTTCATTCTCTTCAACTTCAACT GGTCTAAGTTCTTCAGTAAAAATGAAGGGAACAGCAAAAAGGCCTTTCTTCTTTCAAATTCTATGCTCTTCTTCTAAGCATTCAAGTTTCAAAGATGAAG ATGATGATAATGTTAATAAAGGAGATCGAGGCTTATCCCGGGTGATATTGGTGGAGAGATATAGCAATGGTACTGCTAAGAGATATGTAGTAGATGATGA TTCACAGCTTCAAACCTTTCTTTTTGAAGAGGATAAGTCTACAACAAACATGCTCCAGGATTCGCAAAGACTATCCTGGCTACCGGAGATAATCAAAGAT TTTATTCTACCAGCAGGCTTTCCTGGATCAGTTTCAGATGATTACTTGAACTACATGTTATTACAGTTCCCTACCAACGTGACCGGATGGATTTGTCACA CCCTCGTCACTTCAAGTCTCCTAAAGGCTGTTGGTGTTGGCTCTTTCTCAGGAAGCACAGCAGCTGCTTCGGCTGCTGCCATAAGGTGTCTCCGTTTTGA CTTTTGAGCATACATTTTTCTATATAGAACATTTATATGCGTCTAATTATCTTACTATATGCAGCTATTTATTTGTTATCTAGACTTTTATGTAGTTGAT TGCATGTTTTATGCTTTCATCTTTAGATGGGTCTCAAAGGATGGCATTGGAGCAGTGGGACGCTTATTCATCGGTGGGCGGTTTGGGAATCTTTTTGATG ATGATCCAAAGCAATGGAGAATGTATGCAGACTTTATTGGCAGTGCTGGAAGCATTTTTGACCTGACGACACAATTATACCCGGACTATTTCCTTCCTTT GGCATCTCTTGGAAATCTTACTAAGGCTATAGCAAGAGGACTAAAAGATCCTTCCTTTCGTGTGATTCAAAACCACTTTGCGCTTTCAGGAAATGTAGGA GATGTAGCAGCAAAGGAAGAAGTTTGGGAAGTGGTTGCTCAACTGGCCGGCCTTGGTTTGGGCATATTGATACTGGATACACCTGGCCTTGTAAAATCAT ACCCTGTGCTTCTATCGACTTGGATGAGTATGCGACTTCTGCACATTTGGTTACGCTATGAATCACTTTCAGTCCTCCAGTTCAACACTATAAATCTTAA GCGTGCTCGCATTCTCGTAAAATCACATGTGTTGCACTCTACTGTTCCAGGATGCAAGGATTGCAACAGGGAAGAAAATATACTAACCTGGCCACAGTTC ATGAAACCGGAAATTATTTTTGGCTTGCCTTTGGAGAAGATGAATATAGAGAGATCTCATTTTATGGTGAAGGCATTTCTGAAATTATATGCACATGAAA AATACATTCTTATGGTGAACCAACAGCAACAAGATTTGAGATTTCATGTTTCTTTCAAGGTTGGAGCAACAAGTGTGTCAGTACTGAGAAGTGTGTGGCA AAGTTTCTGGCTAAGTGAAAACTGGAACAGAGAAGGTAATGTTTGTGATCAACTTGGCAACAGCCTAATGGAATTGGAAAATAAGTTTGAGGATTTCATT CAAAAGTTGAAAGTTGCTGAATGGGATACTCAGAAATTAAATTTGAAGGTTCCTAAAGAAATCTTAATTGATGATATCAATCCTCTCTAACTCCTAACAT GTTGGAGCTGAGAATGTTTCACATTTTCATCATTGATATGATCATGCTGTCTTTCAAGACTTGCAAGCATTTCGAACAAGCGGGTAACCTCTACGACTCG ATCTCTACCTCCCGAACTCCCTTTGCCACTTCCTGTAATTAGTCGAGAAAATAAAATTTACAACTAAATATTCGTTGGATTTATTTTCTTGACCAATTAG AGCTCGTGGCACATGGAGTCGGCACAAATGAGTAGTATATGCGATCTTATCCCTAGAGCAAGATATGTTTTTCTTGACATGGAGATATTCAACATGTTGG CCAATTGGCTTTACTCTTTAGCTCATTGAATACCATAGTCTTATTAAGAAGGTTCCTGGTGTAAAGAATCTGTTCTCAATTTTGTTTGAAACATTTAATG TTTGTAACTATTTTGGAGAGAAACTTCATGCTTGCTGTTCAGGACTATGTATACTATACCGTGGACGTCTACCTTGCGATTCTGGCTTCATGCAGGTGAG TTGCAGCCTACAATCCGAACTTAGGATGAGTTTTTGGAGTTAGTTCACCCCTGTGGGATCGCGGTCCTAAACAAGATTGATACCGGATACTCAAATTGAT TACCCTCCTAAAAGGATGGTTTGGAAAATAAAGGTACATGGTGTTAATGTCTAACATTAACTTGGAGCACAAGAAATGTCTCAAAGGGACTTTTATTAAA TTTTATATAAATCTTAAGTTGATAATTTAAAATCAATGGTAGAGATATACTCAAGAAAATACTTACTCTTCATCTTAGCCATCAATTCTAGAGAAATCCA ATGGTTTGAATTAGTGGTAAATCTAAACCAATGGATTTCCAATAAATTGATGGCTAAGATGAGGAGTAAGTCGTCTAAAAAGACTTACTCTTGGAATAAG TTGATCCCCTCCTGAGAAATATAATCATATTTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161386; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361854
| Blastp | Protein root UVB sensitive 5 from Arabidopsis with 66.98% of identity |
|---|---|
| Blastx | Protein root UVB sensitive 5 from Arabidopsis with 66.88% of identity |
| Eggnog | Chromosome 16 open reading frame 58(ENOG410XU74) |
| Kegg | Link to kegg annotations (AT5G01510) |
| CantataDB | Link to cantataDB annotations (CNT0001676) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462270.1) |
| Pfam | Vitamin B6 photo-protection and homoeostasis (PF04884.13) |
| Rfam | - |
| GO | - |