Ll_transcript_362476

• Id Trinity: TRINITY_DN48477_c0_g1_i2
• Name Transcript: Ll_transcript_362476
• Sequence: CTGAATTATAGCAAATCCCTCGAAATGGCATAAAGTTTGTATTTTAGCATTTAATGCGCACATTACATGCCACTTTCTTCTTCTCACTCTTCACACTCTC TCTCTCTCTCTACTGTGATAAAAGAGAAAAAAAAACGTCTTTTTTTCGGGAGAATCATGAGAGAAGAAGACAATGGTTCTGCAACGGAATTGCCCTTCTC AGATTTGCTTCTTGACCGTGAAAAATGTACCACGATGAGTTTGCAAGACAAACAAAAACTAGTCCATAAGATTGCTCAACAGTCAAAAGATGCCCCAAAT ATGCTTCATTCCTTTACTCGCAGGGAGCTTCTAGAAATAATCTGCGCTGAATTAGGTGCAAAGAGAAAGTACACGGGATATACAAAGGGCCAAATGATAG AAAATCTTCTCAAGATAATTTCTAAGGAATCCAAGTTGAACAGCATAAAAAAGACCATTGCTCATCCTCCTGCCGAAAGTCACATTGGATCTAAGAGGAA AAAAGTTGCATCTCATGATTTACATTACGCTCCTCAGGAGAATAGTAAGGAGGGAACTGCGAAAGCCTTGCTGTGTCAGAATGTTGCATGCAGGGCTACA ATGACTTCAAAAGATTCCTTTTGCAAGAGATGTTCTTGTTGTATTTGTCTTTGTTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCCG ATCTTCCCGGTGAGGAGTCATGTGGAAGATCATGCCATCTGCAATGTGCTTTGAGTAATGAAAGCTCCGGCATTTTGAAGGACAGTTGGGGTACAAAGTT GGATGGAAGTTTTTTGTGTGCTTGTGGAAAATATAATGAATTAATGAGCACATGGCGAAAACAGTTATTGGCTGCCAAAGAAGCCAGGAGAGTGGATATA CTCTCTTTACGAGTCTCCTTGGCTCGCAGAATTCTCATAGGAACAGAAGTATATATTGAAGTTCATAAGATTGTAGAAAGTGCCTTCCAGTTACTGAACA ATGAGGTTGGACCTCTGGATCAAGAATGTGCACGAATGACACGTGGAATTGTGAGCAGACTTTCATGTGGTGCTGAGGTTCAGAAGCTGTGTTCTAGTGC ATTCAAATGCTTTGATTCAAAGTTTTCTAATCTTTTCTCCGATGGTACCGGAAAGAAAGATGCACCAGCAGCATGCTCTATACGTTTTGAAGAGTGCCTT CCTACCTCGGTGATCATTGTGCTAGATTATGAAGATCACCATTTAAAGAAATTTTTAGGATGCAGGCTTTGGCACCGGATATCAACAATGAACTACCCTG AACAACCTACCTTCATTGTTTTGAGGCCAGAGAAAAGGTTCAAGTTAGAAAACCTCCATCCTTCTACCGAGTACTTTTGCAAGGCTTCTCTGTTTAGCAG CACTGGGATTTTGAGTGTTGCAGAAGCTAAATGGGTCACAGCTTCTTCAAAAGTCACTACTCCTTCACCTCATAAATCCCCAGTTACAACCATGCACATG TGTGAACATGACATGAATAAGATAAATACCGAAAAACATTATCAATTGGAATCTGCCAACTCGGACATGAAGCTATCATCTAGAAGACATCTCTTCTTGG AAAACAGCAAGAGCAGGTTTGAAGAGTTCCTAGCCAGGTCTCCATCCGTTGAATCCCTTTCATGTAAACATTTTGCTGCAGTTTCGCCTACCACACCTTC CAAATCCAATGAGATGAGACAAAGTAATGGTTTTACTTCTAGGAAGCGCGTGGAGGAAAATGATTACGAGTATTCTGTCCGGGTCGTCAAACGTCTAGAA CATGAAGGGCACATAGCCGAAATCTTCAGAGTAAAATTTCTCACTTGGTTCAGCCTTAAGGCGTCCCAACAAGAGAGAAGGGTTGTTAGTGCTTTTGTGG ACGCGTTGAATGACGACCCTGCAAGCTTAGCAGACCAGCTGATACACACTTTCACAGACGAGATATTTTGTGAGCAAAAATCTCATTGAGTATGCTGTTT GTGTATTATGCATGATATGTCACTGTATGCTTAGATGGCAACTTATTCATAGTTTGAGGGGATGATTTTATAGGTGCAATGTTAGTAACAGTGATCTGCT GTCCCAGATTATGTCTAATACGCTGTCTCGCGTCAATAAAAACATGTCATGTCGATTAAAAACTTTAAATCTTCATCATTATTGTTGTTTTTGTTCATTA CTATTGTCGCGAGACAACGTATGAGACAGTAGATCTCTGTCTGATGGGAGAGGGGTTAGTGTTAACATAACAATTGCATAATCAACTGCACATGCTGTTA CATCTAGGAACCTTAATCTAGGACTCTTATCTTTTATTTAAATTGTTTTTATGGATTCTGTTATGCTTCTAGAAACTCTTACAAGTAGACTTCTTTTTCT AATGAACTATATGAAATATTAATATATATTTTTAAGAAAC
• Tissue: pods
• Gene name: LI_gene_161388;
• Additional information: details;

Expression of Ll_transcript_362476

FPKM

• PAB: 0.6
• PNAB: 4.4
• PS1: 8.3
• PS2: 5.6
• PS3: 8.8
• PW1: 2.1
• PW2: 1.8
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362476

• Blastp: Protein VERNALIZATION INSENSITIVE 3 from Arabidopsis with 33.17% of identity
• Blastx: Protein VERNALIZATION INSENSITIVE 3 from Arabidopsis with 33.17% of identity
• Eggnog: protein VERNALIZATION INSENSITIVE(ENOG410YG10)
• Kegg: Link to kegg annotations (AT5G57380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438490.1)
• Pfam: PHD - plant homeodomain finger protein (PF07227.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;