| Id Trinity | TRINITY_DN48477_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_362484 |
| Sequence | ATTTATTGCTCACATTACATGTTAGTAGTTCATTCTCTCACACACACACACTGTACTGATAAAGAACGCGAGAATGATGAGAGAAGAAGAAGAAGAAGAC GAGGCTTATGCAACCAAATCGCACTTTTCAGGTTTGCTTCTTGACCGTGAAAAATGTGCCATGCTGAGTTTACAAGACAAACAAAAACTAGTCCATGATA TTGCTCAAGAGTCAAAAGATGCCCCAAATATGCTTCATTCCTTTACTCGCAGGGAGCTTCTAGAAATAATCTGTGCTGAATTAGGTGCAGAGAGAAAGTA CACGGGATATACAAAGACTCAAATGATAGAAAATCTTCTCAGGATAATTTATAAGAAATCTAAGTTGCACAGCATCCAAAAGACTGTTGCTCGTGCCAAA ACTCACATTGTATCCAAGAGGAAAAAAGTCGCATCTCATGATTTACATTACGCCCCTCAGGGGAATAGTAAGGAGGAAACTGTGAAAACACTACTGTGTC AGAATGTTGCATGCAGAGCAACATTGACTTCAAAAGATTCATTTTGCAAGAGATGTTCTTGTTGTATTTGTCTTTGTTATGACGATAACAAGGATCCCAG TTTGTGGTTGACCTGCAGCTCTGATCTTCCTGGTGAGGAGTCATGTGGAAGATCATGCCATCTGCAATGTGCTTTGAGTAATGAAAGCTCTGGAATTTTG AAAGACATTTGGGGTACAAAGTTGGATGGAAGTTTTGTGTGTGCTTCTTGTGGAAAAACTAGTGAATTAATGAGGTAAAATATGCATACATGCTTCACAC TAGAGAGAGTTCCCATTAAGTCCTTGTCACTTGTTGATATGCTGATGGATGCACTTGTGCACAAAAGCAGTATTTTTTCCAGTTATATAGGTGTATTTAA AACAGTTTGAGTCACCACATTGTAACATACATTTTGATAGCATCAACATAGCTCTGCTGGTAACATATTTGCGCCTGTGTGCATGTGTATGGTACCACAA GCTCTGGTGTCTCCATTTAAGCTAGGAATATACGATTACGAATAGGAACAAATTTTCCACACGGGACCATAACATGAATCTGACAATAGGTAGATAAGAA CCTAAGTTTTCTTGGATTACTTTGAGAAACGAGGAAGCCTATAATCAACCTAATATTACTTGTGCATGTTCCCAGCCCACCATCCGTCTCTGGTCCAGCC AAAACGAAAACAATAGCTTAGAAATTGTAATTACAAGTCTTTGTCAGGAAGTGAGGTCTGACTATGATTGAATATTTGGATTTTACAGCACATGGTGCAA ACAGTTATTGGCTGCCAAAGAAGCCAGAAGAGTAGACATACTCTCTTTACGGGTATCCTTGGCTCACAGAATTCTCATAGGAACAGAAGTATATATTGAA GTTCAGAAGATTGTAGAAACTGCTCTCAAGTTATTGAACAATGAAGTCGGACCACTGGATCAGGTATGTGCACGAATGACACGTGGAATTGTGAGCAGGC TTTCATGTGGTTCTGATGTTCAGAAGTTATGCTCTGATGCACTTGATTGTTTTTATTCTAAGTTTTCTAATCTTCTCTCTGATGATACCAAAAATAAAGA ATCACCAGCATGCTCTATAAGTTTTGAGGAGTGCCTTCCTACCTCAGTGGTCATTGTGCTAGACTATGAAGATCGACATTTAAAGAAATTTTTAGGTTGC AGGCTTTGGCACCGAGTATCAACAATGGACTACCCTGAACAACCCACTTTCATTGTTTTGAGGCCAGAGAAAAGGTTCAAGTTAGAAAACCTCCATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161388; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362484
| Blastp | VIN3-like protein 2 from Arabidopsis with 43.28% of identity |
|---|---|
| Blastx | Protein VERNALIZATION INSENSITIVE 3 from Arabidopsis with 39.13% of identity |
| Eggnog | protein VERNALIZATION INSENSITIVE(ENOG410YG10) |
| Kegg | Link to kegg annotations (AT4G30200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417852.1) |
| Pfam | PHD - plant homeodomain finger protein (PF07227.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |