Id Trinity | TRINITY_DN48477_c0_g4_i4 |
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Name Transcript | Ll_transcript_362490 |
Sequence | CTTAGAGAGTTGGTTGAGTAACCTAGTTTGGTGTTTTCTATATTTTTAAAAAACCTTCCTTTATGCTTCCCACTAATGCAGTGTGTTTGTTTGTTTGGTT CATTACTTCATCCAATAAAAAAAGATTCCCCACATTATCACTTTTTTCTCTTCATTCAATAAACTCTCTTTCTCTCTCTGGAATCTCTTCAGTTAAAGCA CTTCAGATAACAAAAAGTTCTGAACTTCTGCAACATAAACAGATCCATGCTCAGCTTTTCTGCTTCCCTTTTAAACCCTTCTACTTTGTTGCTTTCTGAG TTGAATTTCCACCTTGGACCCTTTTTTCATTTTACTATAGGATCATAGTTTTCAAGGTCCATTTTTTTTCCAAGCATGCTATGGTTGCAGAATAATAAAA AAAATCAACAAACTTGTCAACCCATGATTAAAAAAAGCAACTTTGATCTTCAAATTTGGTCACTGTTATAAAAAGACTATATCTTTGTGTTTATAGAGTT GATGGGGTTTGCAAAATTTAAGGGGTGTTTTGTTCTTGTGTTTTTTGTTGGATTTTTGGTGGGTTCAGTGAGTGGAATTGGTGTTAATTGGGGTACACAA TCTACACACCCTTTGCCACCATCTACTGTAGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTGAAGCTTTTTGATGCTGATTCTGATATTTTAGAAG CTCTGAAAAAGTCTGGGATTCAAGTAATGGTGGGTATTCCTAATGACATGCTTTATACACTGGCTAATAGTTTGCAAGCAGCTGAAAAATGGGTTTCTAA GAATATTTCAGCACATCTCTCTTCTGGAGGAGTAGATATCAGGTAAACCCTTTTTGTGTTGTTAACTTATTTGTGTTGAGTTCAAGCTTTTATATGATAT ATTGTATGAATGCATGTCTTCAACCATGTAATTCTGCACTTCATTTACTGGAAGGAGGATGTATGGGTTTAGATTAAACACACTGTTTTAAATCGCGATC ACGGTTGCAATTGCGGTCATTGCGGTAGAGATTGTGGTCATTGTCATGCAGATTGTCGCCATTGCGGTCTGAATTGTTTTATGATTAAAAAATATTTTTA AAAGCAACATGGTCTGATGTGGTTGCAGCCTGATGTGACCTGAATAGTTCCAATGTGGTTACATTGCAGCCCAATTCAGTCTTATCATTGTGATTCGTTG TGATACGGTTGCGGCGATCACCACAACCATAATATTGTCGTCACATCATGTGAGGTCTGCAATTTGGGCTGTGTTTTGCGATTCAATGCTTTTAAAACTG TTGTTGTTAGTCTACTCTGTATTTTCTCAAACAGTATTCGGATAATTTTCTGAAGGTACATTGCTGTTGGAAACGAACCGTTCTTGTCAACTTACAATGG TACCTTTGAATCTACAACTCTTCCAGCTCTTCAAAATATCCAATCAGCTCTTGTAAAATCTGGTTTGGGCAATAAGGTTAAAGTCACTGTCCCTATGAAC GCTGATGTCTATCTGAGCGCATCCGATAAACCTTCGGATGGCGACTTCAGGCCCGACATCCACGATCTCATGCTTCAGATTGTCAAGTTCTTGAGCCAGA ATAATGCTCCATTTACTGTGAACATATATCCTTTTATCAGCCTCTATTCAGATGCAAATTTTCCTGTAGAATTCGCCTTTTTCAACGGCTTCCAGTCTCC CATAAACGACAACGGAAGGATCTACGACAATGTCTTAGATGCGAACCATGACACACTAGTATGGGCACTACAGAAGAACGGTTTCGGAAACTTGCCCATA ATTGTTGGAGAAATAGGGTGGCCTACAGACGGAGACCATAATGCAAATGTTCAATATGCGCAACGTTTTAACCAAGGCTTCATGTCGCGTTTCATTGCCG GAAAGGGTACCCCAATGAGGCCTGGTCCTATAGATGCATACTTGTTCAGCCTCATAGATGAAGATGACAAAAGCATCCAGCCAGGTAATTTCGAACGCCA TTGGGGACTATTTTACTACGACGGAAAGCCAAAATATCCACTTAACCTCGGAACAAGAACCAACAATTTAGTAGGTGCTAGTGGTGTTGCATATCTACCG AAGAAATGGTGCATTCTGAAACCCTCAGCAAACCTGAATAGTGATCAAGTAGCACCAAGTGTTTCTTATGCATGTCAAAATGCAGATTGCACTAGTCTCG GTTACGGAACTTCGTGCGGAGGCTTAGATGTTCGCGGTAATCTCTCTTACGCATTCAATAGCTATTACCAGGTGAATGACCAGATGGACAGTGCATGCAA ATTCCCTGGCCTTTCTGTTGTTACTGACAAAGATCCTTCAACTCCAAGTTGCAAATTCATAATCATGATTCAGACAGATTCTGCTCAACTTATTAGGAAT AGGAGGAGAATTTGGTTCCTACCTTTGTATTTTTGTTTCTTAATGTTATGTAATCTTTAGTCTAAACACATTTTGGTTCTTAAGTTTCTTTTGGAGCCAA TGTAATATGAAGCATGATGTACCCATTAAACAATCTTTTAAATGTAGGGTATTGATTGAAGGCACTAAATTATTAAACACATAGTCAAATGTAAATTTAT TATAGGC BLAST |
Tissue | pods |
Gene name | LI_gene_161391; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362490
Blastp | Glucan endo-1,3-beta-glucosidase 5 from Arabidopsis with 64.6% of identity |
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Blastx | Glucan endo-1,3-beta-glucosidase 5 from Arabidopsis with 70.03% of identity |
Eggnog | glucan endo-1,3-beta-glucosidase(ENOG410YE7X) |
Kegg | Link to kegg annotations (AT4G31140) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447498.1) |
Pfam | Glycosyl hydrolases family 17 (PF00332.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |