| Id Trinity | TRINITY_DN48481_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_362006 |
| Sequence | TCCAGGGCAAAGGGAAATAGCATCATGTCCTTTCATAACTGCTTATATCAACCCTCATTACCATGCCTTCCCTCATCTTCTTCTTACTCTTCATAATATT CTTCTTTCTATTCGGATCTTCAATTGGGTCTAAAGGATGGATCCCATGGACATAGTTGGGAAATCAAAGGAAGATGCTTCTCTTCCTAAAGCGACAATGA CGAAAATTATTAAAGAGATGTTGCCCCCAGATGTCCGTGTTGCAAGAGATACTCAAGATATATTAATTGAGTGCTGCGTTGAGTTCATAAACCTCCTCTC ATCAGAGTCCAATGAAGTCTGTGGTAGGGACGAAAGAAGGACAATTGCACCTGAGCATGTATTGAAGGCTTTAGGGGTAATCATTAATGATTATATCTCA AGTTTTAATGTGGATACGTTCCAATTTATATTTTAGTGTATAAGTTCTCTCCTTTGACGTGTGGCATTTTGTTTCTTTTTTAACTTCCGCTTCTGTTATA CTTTATTTTTCATCGTGTTGTAGTTTGATGTCCGACACCACCAACCATAAAGGGTTATATTGGTGTGATTTGGATCCTTGATCATATACCTTGTCTGAGT GTTGTTAACATATGGAGAACTTAATTGGCTTTCATAGTATGTACAGTTTTAGTGTGTGAATATTGAGATGGAGACAGCATGTGGCATAATTATCTAGGTA GTCATTCGCGGAGGAGCAGTGCACTCTGGCCCTCCATGCGACATGAAGTTAAATCATGGAGCGGACAGCTGTTACCCTCAGTCGCGTCTAAATCGTGGTG TTTCCGTGAATAGCGTCCGGGATAGATTTCATTAAGAGTGAACCTTGGTTAAGGCTGAAAAGCTTATTTTACCCCTACTAATATTAAATCCTAATTTTAA TGTATTAATTATTTTGCCCTACCCTCTTTTTTGTGATTTGAGCCAAGACCAACAAAAGCTTCTGAAGCCTTCTCTTCCTTCTAAAGCTTCTGAAGGACCA AAAACTGTTTACTCTGCTGAAGCTTTCGAAGCAAAGACGGAACAGAGCTATGGAACCTCAAGTTCTGTAGTGACATTTGCTCATTCCTGGCAACTCCCAG CAGTATCCAGCCACCCACCTTATTCTTCTTCTTCCCCTCACTTCTGCACAGCCATTCATCTCAAATTCTAAACCTTGCTTCCATTTAAGGATTAAACTTA AAGTGGATAGTGATTATGCTGAATGGAACCACTTTTATTTAGTTTCATTCTTAGATTTGTGTCTTGAAGCCCTTAGAAGCTTAAACTTGTTTTGAGTATT AAAAATGATGTGTGTGTGTTTACTTTGGATTTGAATTTTTGACACTGACTATGAGTTTTGATTACTAATTATGAATGTCTTCAGTTTAGTGTTTTAGTAC ATTTAGTATTTATATGTATAGGGTAAATAAATTATCTATACTTGCTGTAACGGCCATCCCGCTATCCTGCTATTGCATCTTTGGGGCTGGCTGCTATCTG TGCTTGATTAACTTGGTGATTATGCAATGGTCATATAAAGGTTCTTAGTGGTTCTATTTAAGGATTATGATTTGGAAGCATTCAGATTAGTTGATAATTG TAACAAATCATGCTTTCCATTATTTGTAAAACCTGATTTGCAAGAAAGTATTCTTAGTTAATCAGCAAATTGAAACCACAGTGAATTCATGACATACCTA CCCTGAGGCTCAAGTACTGCTTTACAATTCCTGAAATGATATTCTCTTGGTAGCACCTCGACACCTCCTAATTATGCTTTCATCTGCTTCCTACTTCACA GACATTGAAAATTGTCAATGCGTAATTCATAAGATTGTCATTCATCCTGAACTCAAGTAGTTGATCGTCTTTTGTTAGAGCAAATTACTTTGGTTTCCTA CAAACAGTTGATAATTGATCCATAAATGTATTTTGCTTAGTTGCTACTACATAAAATGTGGTATTTATTTTATTTTGTTGTATTTAGGATTGTGCCAGAA TATCTTAATTGAAAGGTCAATTTTCACATGATCCCTTATTAGTTCCTAAGTTATAAAGTATTCCAGCAAAGCATAAGTTTGTTTCCTTTTGTTTTGAAAT TTGAAGCATGCTATTTGTTTATTAATTTTGTATTTGATTTTATCAGGGTCTTGGTTTTGGTGAGTACATAGAGGAAGTTTATGCAGCATATGAACAGCAC AAAGTGGAGACTATGCAGGACTCTCTAAAAGGTGCTAATTTGAGCAACAGAGCTGAGATGACCGAGGAAGAAGCATTAGTAGAGCAGCAAAGGATGTTTG CTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_161420; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362006
| Blastp | Protein Dr1 homolog from Arabidopsis with 74% of identity |
|---|---|
| Blastx | Protein Dr1 homolog from Arabidopsis with 82.95% of identity |
| Eggnog | Down-regulator of transcription 1, TBP-binding (Negative cofactor 2)(COG5150) |
| Kegg | Link to kegg annotations (AT5G23090) |
| CantataDB | Link to cantataDB annotations (CNT0002891) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417431.1) |
| Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone (PF00808.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |