Ll_transcript_362009

• Id Trinity: TRINITY_DN48481_c1_g1_i6
• Name Transcript: Ll_transcript_362009
• Sequence: GTCAAAGATATGATTGATTAAAAAATAATTAATTATTAATTTTTTAATTTAAAAAATATTTTTCAATCAATGATAAACATTACATCGAATGATATAACTG GTAGGATAGTAGATGTACTACCATCATCATGCCCCCTTTAGGAGTCCTACTCCTCATCATCTTCTTTCAATTTGGATCTTCAATCAGTTAGTTAACTACT CAGTCTGTCTATTCAATCTCATCTCTTCTACTCAATCGGGTCAAAAGGATGGAGCCCATGGACATCGTTGGAAAAGCAAAGGAAGACGCTTCTCTTCCTA AAGCAACAATGACGAAAATTATTAAAGAGATGTTGCCCCCAGATGTCCGTGTTGCAAGAGATACTCAAGATCTACTAATCGAGTGTTGCATAGAGTTTAT AAACCTCCTCTCATCAGAGTCCAATGAAGTTTGTAGCAAGGAGGAAAGAAGGACGATTGCACCTGAACATGTATTGAAGGCTTTAGGGGGTCTTGGATTT GGTGATTACATCGAGGAAGTTTATTCAGCATATGAACAGCACAAAGTGGAGACAATGCAGGACTCTCTAAAAGGTGCTAAGTGGAGCAACAGAGCTGAGA TGACTGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCTGAGGCACGTGCAAGAATGAATGGTGGGGAAATTGCTTCCAAGCAGCCAGATGCTGA CCAAAGCTTAGAGAGCTAACTTTAGGATCTTTATTTTCTTGAAGCGTAGACAAGCATCTCTCACTCTTCCTTATGCCTCTAATTTACCAAGATGGTGTAC AAAAATCATTCACTAATATTAGCTGAACCTACATAGTAAGATTAAGGTTTTATTGTGTTGTTGTTGTATTATTAAGTAAATGTGTCATTTGCAAGTTGGG TTTTAGAGTGAAAGGAAGAGAAGGAAAGGCTTCCGGGCCATGAGATACACTTGTGATGTGCTATAAAGCCTTTACTTTCAGTCCAAAACCCAACCGGCAG ACAGACCCTGAACCCCATCTATATGGAGTTTCATGTAAATTATTTTATTTACCTTTTGCATCAGCTTTACCCTAATATATCTTATAGCTTACGTTGGACA CTGGTGCATGTTAGATTGTAAAAATCTAATAATATATATTGCAACAGTCAATTTATGTATGTCGTTATACAAATCCTCAAACTTGGTAGTTATTTTTTAT TGATGTATTAGCGTTATGATTGTGGACCAATGTAATAGAAATTTGTATTCACTATTATTTTTCGGGAAAAAAATGTATTTTCAGCACTTAGAATTCTTTT ATTGATAAATGAGGAG
• Tissue: pods
• Gene name: LI_gene_161420;
• Additional information: details;

Expression of Ll_transcript_362009

FPKM

• PAB: 51.1
• PNAB: 15.2
• PS1: 28
• PS2: 22.1
• PS3: 31.7
• PW1: 31.6
• PW2: 28.4
• PW3: 24.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362009

• Blastp: Protein Dr1 homolog from Arabidopsis with 79.87% of identity
• Blastx: Protein Dr1 homolog from Arabidopsis with 79.87% of identity
• Eggnog: Down-regulator of transcription 1, TBP-binding (Negative cofactor 2)(COG5150)
• Kegg: Link to kegg annotations (AT5G23090)
• CantataDB: Link to cantataDB annotations (CNT0002891)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437093.1)
• Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone (PF00808.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;