Ll_transcript_362007

• Id Trinity: TRINITY_DN48481_c1_g3_i2
• Name Transcript: Ll_transcript_362007
• Sequence: CGAGAAGTGGTTCTCTTATGATGTGAAACCTTCTTCATAAATTCATATACTAGCCATGTCTTCGTTCCACCTCCTCCTCTTTCGTCTTCATCTTCCATCG CTTCATTCGTTATCTTCCGTTCTCGCCTTCACTTCTTTATCGGTTGAACCATGGAGCCCATGGACATCGTTGGAAAATCGAAGGAAGATGCTTCGCTTCC GAAAGCTACTATGACGAAAATTATTAAAGAGATGTTGCCCCCAGATGTACGAGTTGCAAGAGACGCTCAAGATCTATTGATTGAGTGCTGTGTAGAGTTT ATTAATCTAGTCTCTTCAGAGTCCAATGAAGTCTGTAACAGAGAAGATAAAAGGACTATTGCACCTGAGCACGTATTGAAGGCTTTGGAGGTATTATATG TTTTAAATAGAAGAGTTCATTTTCTTTAAAATGATTTCTTTTAACTCATGAGATGAAGCATTCCAAACTCTTCATAGATTTGTTTTCTTTATATAAGCAT CTACAGGAGTGAGGATGTCAAGAATGGGTAAATTCGATGTTTTAAACATGTCTGTTTTACCTCTGGTTATTGATTAGCACATGTTTCTTTCCAGGTGCTT GGATTCAGTGAGTACATTGAAGAAGTTTATGCAGCGTACGAACAGCACAAGCTGGAGACCATGGTAATTTTTAACATTAGTGCCACATGTGCATGTTGAA TTGCTTGAGTTGTATAATGCAACTTAGCATAAATGCTCTTTTACCCCTCTCAGTAATTTCTATGTGCGTGAAAACCTCCAAAATAATAATAATAATAAAT AGTAAATTAAAAACTAAAATCTGTGTTGAGGGATTGAGGAAGCGTAGACCTCATTGTTGATCCTCGAAATAAGCCCCGAATCCAATTGGGGTTCCCTTGG TTGAAATACTCTGGAAAGGTCATAATGGGCTGGTAATCTGAAAATGCTACCCACTCCTTTCCTCCCCACTGGCTGTTTTTAGGATGCTGGTTGAGAACAT GGCCTGACATTTTTTTTGACTGTTAAATTGAAATCACCTATGAATCAGTTGTTTTTACTGTCCTGTGCTCATAGAGTTTCTAGATATTTCATAAACTCTG AAGTTTTAATTGGGTATTCTGCGGTTGAGAGTTAAGAATGATGATTTTGTTTTCTGGCAAGAAATCAACAATCTGGTGTATAATTGAGTTGATATTCATC AATGATCATTGATTGTGGCGATATCATTGAGCAGTGTAATTAGAAAGTGAATTTTGAAGCTGTTAATAACTGTTGGAAAGAGAAACTAATTAGTGATTAA TTTCGTTATTCCAGCAAGACACTTTAAAAGCTGGTAAGTGGAGCAATGTAGCTGAAATGAGCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGC AGAGGCACGTGCTAGGATGAACGGTGGGGCCGTTGCTCCCAAGCAGCAGCCAGAAGGTGACCAAAGTTTAGGTAGCTAATAACTTTAGAATCTTCACTTT CTTGAAGCACAAGCTACCCCTGACTCTTCCCGCCTCTGTGCTTTCTCCTTTCTAGTTAGCTCGATTGTACAAACCAACCCATTCACTACTTTGCTGGCCC TATATGTGGAATGTAACCTATGAATCCATATTTGTAAGTCAATGTAATTAGTGAGTTCTTCAAAACCCCTCTACTATTTAGAATTACCTCTTCATTATTT CATTTACTTTTTGGTATCTCATTTTCGTACTAACACAGTAACAGTTTTAGGTACAGATAATTATTGAATATATTTAGAAGCAGTGTTCTGTTTATTTCTG TTTGAAAAATATAGGAAATTTTTTAACATGTCAGTTACACTCATCTTTAAACTTGCCATCATACCTATTAAGATGATAGTGG
• Tissue: pods
• Gene name: LI_gene_161422;
• Additional information: -

Expression of Ll_transcript_362007

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362007

• Blastp: -
• Blastx: Protein Dr1 homolog from Arabidopsis with 95.12% of identity
• Eggnog: Down-regulator of transcription 1, TBP-binding (Negative cofactor 2)(COG5150)
• Kegg: Link to kegg annotations (AT5G23090)
• CantataDB: Link to cantataDB annotations (CNT0002891)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_006579721.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;