Ll_transcript_363142

• Id Trinity: TRINITY_DN48485_c1_g2_i4
• Name Transcript: Ll_transcript_363142
• Sequence: GGAGAGAAAGGAAAGGAAGAATTGAAAGAAAAGGAAGAACTGAAGGAAGAGGAAACTAACATTATTGCACACAAAGAGCAATCTAGTACTGTGTCTTTTA GTGCAGGAGTGAAAGATCAATTGCAAACGGACGTTAGTCCTGAAAAGGATGTTGATGAAGTAATGAAGGGTAGTGAAAAGTTAGATCTCGGAGAACAAGA TGGAGAGGACTTTATTGAGGAAGACCCTGAGGAACCTCCCGATGAACCTGAGGCATTCGAAGAGCAGCATATAGAATATGAGGCAATTGCAAAACAGCGA CAAGTTAACAAAGAACATGAGATATTTGTGGGAGGGCTGGATCGTGATGCTACAGAGGAAGATCTGAGAAAGGTTTTTGAGAGGATTGGGGAGGTAGTCG AGGTCAGGTTGAACAAAAATTCTTCAACAAATAAAAATAAGGGCTATGCATTTGTGAAGTTTGCTAATAAGGAACACGCAAAAAAGGCTTTGTCAGAAAT GAAGAACCCTGTTATACATGGTAAACGATGTGGCACTGCACCCTGTGAGGATAATGACACATTATTCTTGGGAAATATTTGCAATACATGGACTAAAGAA GCTATTAAACAGAAGTTGATGGATTATGGTATTGAAGGGGTTGAAAACATTACGCTTGTCCCAGATGTTCAACATGAAGGGTTGAGCCGAGGTTTTGCAT TCGTTGAGTTTTCTTGTCATACTGAGGCCATGGTTGCATACAAGAGGCTTCAAAAGCCTGATGCCATCTTTGGCCATGCTGAGCGAACTGCCAAGGTAGC CTTTGCTGAACCCATACATGAACCAGACCCGGAGACGATGGCACAGGTGAAATCTGTGTTTATTAATGGTCTACCTCCTCACTGGGATGAAGATCATGTT AGGGAACTGTTAAAATCTTATGGTGAAATTGTTAGAGTAGTACTAGCACGGAATATGTCTACAGCTAAGAGGAAGGATTATGGATTTGTTGATTTCTCTA CACATGAAGCTGCTGTAGCTTGTGTTGATGGTGTAAATAAATCAGAATTGGGTGACGGGGTGTCAAAGATAAAAGTGAGAGCCAGGCTTTCAAATCCTTT GCCTAAAACACAGGCTGTAAAAGGTGGCATGTCTGGTGGGTTTAGAATTGGTCATGCTAGGACTGGAGCTCTTCCAAGACCTGGAAGGGGTTTTGGGCGT GGAAGACAGCCTTTCAACAACTGGGGAAATTTCAACAGGGATAGGAATTTCTATCGTGGTCGTGGTGGATACAGTCAATTTGGAAGAATGGGTTCTCGGG ATGACCGCAATTTTAATATGCATCCAGATTTCCATCATAGGCAATTTGGAGCTGTGAGAGGTGGGCATTATCCACGTAGCCGAGGTGCTGCATTTGTCGG TCCATCTAGACATCATGATAGACCTTGGTATGGCATCCCTGATGGAGGTCCTAGGGAACCAATTCCTATGAGAAGGCCCTACTCCCCAGGTGGGCAGTTT GACAGGCCTTTTATTGGACAGCATTTTGATGATCCATATCTCCATGATGACAATTTGCATGGGGTGAAACGTCCATTTTATATGACTGAGCCTGAACCTG ATTACATGGGACCTAGTAGACTTCGACCTCGACTGGACTACGCAGATCCAGCTTTGTTACATGGAAATCGTTACCATGATCCTTTTGGGGAAGCCAGCAC ACAGTACCCACCTGACCATTATCATTATGGTTCAGATTATGGTGGAGGTCCATATTCATCTTTTTATGAGGGTGATAGCTCACATGGGCATGGATACCAC TATTAGCCTGAAGAACCTTTCGGTGGGATCTGGAACTGTGGAATGGACTTCTTCAATTATGAGCATGCTGCTTGAGCATAACATTTTGAAGTCACATGTT GCTTTTGTACACTTGTTTCTTATTATATCCCTTGGGTTCTATTTATATAATCTGCTAGACCATATGTGCTATAGACTAAGTGACTTAATGTGTGGGGTAG GCTGTCTCTCAGGTCCTGGACTAAGGTATTAATTAATAAGATCTTATGTGGAGTGGACTAGGTTTCCTTTATTTACTTTGGTACGATGGGATCATGGACC TAAGTTTGAGGATGCTTTATGTATGTACAATACAACTTTACTCATAAGTATAACTTTGATGATTGGAAAGTTTATAGGACTACTGGAAGCAAAAACTTTC ACTTGATGGATTTATCTTTTGGCAATTTGATAGGCAAGTTTTGATATTTCAATATGCGTATGGAGTCTCTTATGATTCATATGAAAGTTTTGAAGAGTTA ATTTTACTTTCATATTAGGAGCCATATTTTGTGATCTGGACTACTTTGGAGTTTGTTTGACTGATTAGGTGGGTTTCTTGTAAGTATTTATTGATGTCCA TATGAAAGCACTCTTTTTATGACAGTCTTTATTGAATTTGCTGCAAGATAGGACCATGGACTAAATACAGTGAAAGGTTAACCTTTATTTGAAATGATGA TCATGGATGCTTTTGTGGTTATGGAGCACAGGATCAAGTTGATTGATTTGGTTCCTTATGATACAAAGTCATTGGTAATTTGGGTATCCTTGAGTAGGTG TTCATGTTTTAAATCTTTTGATGTGCAGCACTGGCACTTGCTGAGAATAAAATATCTGTAGATATAGTGTGAAATGTCCAATGGTATGGGCATCTAAGGA TGTGTGTTAATGTTTTGCTTGTCATCTATATTTTCCTTGGATGGCTTTTGAAAAAATACTGTCACTAAGCAAATGGATCTGTGGAGAAATATTAATCGGC TGTTTCTCTCTCTCTCTCTCTCTAATGGCTGATTATAATGAATAAGTGGTAGGTGCTAAGTGATAAGAGTGTCACTTTGGGAATAACATGGAGCGGAAGC AATTACCGATTAGTTAGGTTTGTGATAAATAGGGTGTTTCTGCTTTGTTATCAAAGGAGGGAGCTGGCCTCAAATTGGTGCTGTCCTTCTAGAATAGTTA GGATATGTAAACTGTTGAAGATGGTAGCAGTGGCTTTTTTTAATCCAATTTCAAGCATCATGTGTTTCTGATAGTTTCACAAATTCTGATCTGAGTTTTG TTTGACACGGATAAGGCAATTATCTTTTTTATTGAAAATGTCTTGAATATGAGACCCACATATTGGTACGTATATGTTTGTGTTTGAACAATGTTTTTTA CTCTTATTTCCTTGGTTTAGGTACCTCTACCTTCTATGAGAAGGTTGGTTTAGGTTTTCAGATCAGATTAGCATCATATTCAGTCTTAGTCAGACCAAAG GCTCTATTTGTCCTTTGTTATTTAACTTAACTAGTAGGGCATTATAGTAATTACAAATCTTTTACAAATTTATCAATTAAAAGAATCCAATTGTAGTAAT TTGCACAGTAAGTCAGTAATTGCGATCTGATAGCCTACCTCATACAGAAGATCTCAAGAGACTTCTCCATTTTTTTTCTGTTTATTCAATGGATTTCATC GCAGAAAATTGCTGTATAGGTACAGAGGCAGCTAATACTTGGTATATTGGGATGAAGCATTTATCTTCATTGCATTATAACATTGGCCTGGTGTGCTCCT GTTGGCAGCATGCCAAGGCTTTGGTGAGATGCCTTCCTTCGTCAGCCGGGTTTGAGGTTTACCCGAGTGCTTATTGCCTTCCTCCATTAAAGGATGGTAA TAACCTTTCGAGGAACAGATAAGTATGTGTTTCTGATAGGTAGGATCAGCCTTTGGTGTTGTTACTGCCATGAAGGGTGTTGGTGTGGCCTCTAATGTGC AAATTTGCCCAATCTGCATTGGAGTCTCATGTCCTGAAGGGAACTGGAAGATGGGAAAAGAAGACCTTTTCAGGGTGAACCCTTAAGATATTTGAGGATT CTGAATGCAGCATCTAGATGTGTCACTATTGGTTTCTGCATGAATTGACTCACGGCTCCAACAAGATAGGCAATGTCGCCCCCGGACTGCCGGATCCCAT GAGTAAATAGAAAGTTGGATCTACGTTGGAACTCATTTGAATTGCCCCATCTATCTTCTTGAGAAGTTTGGTTTCAAACTCGAGTTCCAACTAAAGTACA CCATGCTAATGTGCCTTTGATGATCCACATCTCTGCAACGATCATTTGCATGGACCCACTTCTCATTCGATTTTTGGGAATTTGATGATCTATAAACCAT CCCTAACGATCTATCACCTCATTTTTTAGCATGATGAATCACTTTGTTGCCATTAA
• Tissue: pods
• Gene name: LI_gene_161442;
• Additional information: details;

Expression of Ll_transcript_363142

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 1.4
• PS2: 0.1
• PS3: 0
• PW1: 1
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_363142

• Blastp: Heterogeneous nuclear ribonucleoprotein Q from Arabidopsis with 34.29% of identity
• Blastx: Heterogeneous nuclear ribonucleoprotein Q from Arabidopsis with 34.29% of identity
• Eggnog: RNA binding motif protein(ENOG410XTJ5)
• Kegg: Link to kegg annotations (AT4G00830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423517.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;