Id Trinity | TRINITY_DN48488_c0_g1_i2 |
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Name Transcript | Ll_transcript_362349 |
Sequence | AAGCCTAATTTTGGAATGTTTGGATTTGGTGGACCTATTGCAGCTATGCATTTGGGGCAGCGTGTTACAGTTTCATCCAAGACAAAAAATGTCAAGAAAG TCTACATGCTAGTCCTTGATAGAGAAGCTTTGCTAAGTGCTTCTAATTCGAACCGCACATGGAAGTCTAATGGTGGCATCAGGGATCCAACTGAAGCTGA AATCCGGGATTCTAATCATGGAAGCTTTACGAAGGTTGTGATTCGTGGCCCGAAAGTAAAAGATGTGAATATATCTAGACTCCAGTGTCACCTGAAGGAC ATCTATTTCCCCTATATTCAAAGTGATGATATGTTTAACAAAGGGAGGACTAATACTCCCATAGAGTTCCAGGTTAACGGCGAATGTTTGACTGAGATTG AAGGTGGTGAGGTTGCAATTACCAATTTGCTTTCTTGCAACGGTCCCGAGTTTATTATACAGCTTCATCTATCCAATGCTCTCAAATATGATGGCATCAA AAGTTCTAGCTCCAAAGACTTTCAACAAGCAAATGCGCGCTTAAGATTCGTGTATTTTCCATTTAAAGAGGGTAAAGAAAATTTAGGACGGGTTTTGGAG AAGTTAATCGCGAATGGTTATGTAACAAGAGAAAACTTCCAAAGCTTTAGTCGTGTCTCCGTCAGGCGACTTGGCCGTTTACTCCCTCAAGCACGCTGGA GTTTGCTTCCTTTTATGGAAGTTCGGAACAAAAAGGGAATCAGAGGTCAATTACTGAAGAGATGTTGCTTGAGGGTGAAGTGCTTCATTGAGACTGATGC TGGTTTTAAGCCAACACAATCCAAGACTGATCTAGCTCACCACAATCTCTTTACCTTAGCTTTGAAGAACTTCGGGGATAAAACACCAAACCAAGTGAAG GATATTGAAGTTGAAATACGCAAGGATGGAAAAGTGTTCAGTCTTCTACAGCTAGAACGGGACTACGAAGACTGGATTTTAGGAATGCATGATCGTTATG ACGAAGAAGTTGGTTCTGGCGAGGATCAGCCCGTTATGATGGTTAGCCCTGCAAACAAAAATGCACTTGGCATCTCTTCAGACGTCATTAGAGTGCATCA ACAATTAAAGCGAAAGGAAGAGTTTTGGAAGTCAGGCCAGAAAATCAAAGTGTTAAAAGGAGCATGTGCCGGGTTTCACAAGAACAATGTTTATGCTACT TTAGAGTACTTTTTGCTTGAAGGATTTGAAGGAGATGCTGGTGGTGATGCCCGAATCATATGTAGGCCTGTGGATATCCCTGATGAGAATGGTTGTGTCC TTTCATTGGATGATGAGAATGCGAGTTTAGAGATTCGTGGATCAGTGTCGTTGCCTTTAAGTGTGATCGATACTGGAAAGCTTGTGACTGTTGAAAGTAC TGAATGGGATACTCATCTGAAAAGGAAACAACTTAAATCTCCAGCTACAATAAATTTGCTAAGTTCAGACCATTGCCAAGTTTTGGAGGTTGATGGGGCT TTGCCTCTTGGCGATCCAGTTTTTGCTGGCCATGTGCCTCCACGTCATGTAGTGGCAGTTATTCGGCCTATAAATTTCATGCCTAGTGCTACAGAAAAGT TAGACCAAAAGGATATTTACAAGAGCAATGTTGAGATGATAATGGAAATAGAATTTAAGAGCGATCACTTGAATGATAAACATGTTATTCATATCGATCG TGCATCGCCAGAATCCAGAAAAGGGTTTAGCGGTTTGTATTTCTTTCCTCTGCGACGCAAAGCTCAAGATTTATTTAAGAAGGCTGGCACTTATATATTT TCCTTCTCCCTTATTGACTCAAGCTGTAAAAGTGTTGACAAAAGAGTGACTGTGAAGCCTTCTCCTCATGTTGGGAAGTGGAAACCTTTGAGTGATGACC AAAATCGCCAACTTGTTGTGAGGGTTGGTTCAAATATTCCAACATTAACCTTTGCATGCTATGATATATACGACAATCGTGCACCGTTTCCAGATATTTC AGCACTGACAGTCAAACTTCTGGCCGAAAAGGGCTCACTATTTGAAACAAACAGGGTGAAGTTTAGCCTTTCAGTCAACAAATTGGTTCTAAGTATTAAG GATGTACTTGTTAAAAGTAAGGAACTGGACAAGATAAGACCAGCTTATGGAGCCACTTTGGTGATCGGTTCAGGCAATGAGCTATTATCTGCTTCCATTG CATGCCAAGTTTATCCAGGTTATCTTAAGAATGTTGAACTGAGGCCTCCTATAACAGAAAATCAACTTCGCCCGGGCTACGTTTTTGAGAAGCTAGCCTT GGAGATGTTCGATGCATACGGAAACCACGTGTTAAAAGGACCGGAGGTTACTTTGTCTCTGGATGGATTCAACATCCCAGGTCATGTTGGCATGATACAC AAGGTGGATGATAATGGAAGAATTGATCTTGGTGGTCTGCTGAAAGTAACAGCAGGTTATGGCCGAAAAGCATCTATATCTGTTCTATTTGAGGGTAAAA CCATTTTCAATCAGGAGTTTTCAAGCAGGAGTTTTCAACCTGATAATATTATACGGCACGAGCAGGAGTCGCCATTTAATGAAAATAGAAATTTCGTGCT AAATAACGATGACAATGTACAGGTTCGTGTTGCGGAAACACAAAACATGGTGGTTGAATGTTGTCAAAAACCATCTCCTCTTAATGTTATAATGCAGGAG CAGGACTCACCAATTTCTAAACATGAAAAGAATTTACTAATATCCCTTGTAAATAATGCTGAAAAGGATATGTGCAAAATTGCCGAGGCAATCAGAGAAT TGGAAGATGGTCTTGATCATCTTAATAAGCTAAAGGATAAAACTGAGCAAGAGATGGATAAGTTACTAGAGAATGTTGAACCTCAAAATTTGAGCTCTAA TACCATTACATTAACCAAGGAGGAATTGAAGTTGAAAATAGAAAGAATGGAGAACACAGCAGCTTCTGTGCTCTCACTCTGCAGTCTCTCTGGATACCGA AAGCAACCGAAGTGTTTCCGGGATGATATAATTGGCCTGGTTGTACTGTGTGGTACTGTCCAGAGCCCTGATCTTAGCAGAATATTGGCAGAGTATCTCG GTGAAGATAAAATGCTGGCTGTTATTTGTAGATCCTTTGATGCTGCATGTTCCCTTGAGAGTTACAAGCAAAACGGAGCTGTCGATTTGGAGGGTGGTTT ACACGCTGAAGCAGCTACTCTCGGAAAAGCTATATGTAACCGTTTCCTCGTTTTTTGCCTTGAAGATATAAGGCCTTACGCTGGGTGTGTCGAAGAGAAT GACCCGCAGAGGAAGTTGGCATTGCCAGATCCTATCTTGACAAATGGGAAAACACCTGCAGGATTTATAGGTTATGCAGTCAACATGGTTGAGCTAGACA CCAATCACTTACAGATTAGTACGGCTTCCGGCCACGGGCTCCGTGAGACGGTGCTGTTTAGCCTTTTCCGAAAGCTCCAGGTTTATGAAACAAGGGAGAG CATGATGGCTGCTTGTGATTGTATAGAGGATGATGCTGTTTCATTGGATGGTGGTATTTTAAGGGAAAATGGCCTCCTTTCTCTTGGTTATGGGGAACCT TGCATATATTTTCCTTGTGAGAATCAAATAATCCCCTCTTCAGAAACCGGAGACATCACGGAACAGGTCGAGGAAAAGAAGGAAGAGCTGAAGTTGATAG AAGAAGAGTTCAGAAAGTTTGCTAAATATCACAAGAAGTGTCTGAAGAAATTTAAAAGAAAGAAGGCTCATTATAGTAACCTTTTGGACAGAATAGAATT ATTGGAAAGTAAAACAAATGCAGGAAACAAGTCAAAGAAGCTTCATATTTGATGCAATGGGAAAACAACTGTGTAGTGTATATAGTGTGTACCCTTTGGG GCATTCTTTTTTTGCATATGAAGGTTCCTAGCAGTGTTATTAAACTACTCAACATTTGTATGGTATTACTTTTGACATTAACATCCATACTCTCCCGAAC CGAGTCTCTTCCACTGGATCGCTCTTACTGTTTTCATGTTATTAAGAGAAAACACTTCAATCATTAATGAGACAAAAGTAGGAGGTTA BLAST |
Tissue | pods |
Gene name | LI_gene_161476; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362349
Blastp | Protein DEFECTIVE IN MERISTEM SILENCING 3 from Arabidopsis with 37.38% of identity |
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Blastx | Protein DEFECTIVE IN MERISTEM SILENCING 3 from Arabidopsis with 37.38% of identity |
Eggnog | NA(ENOG410YVP4) |
Kegg | Link to kegg annotations (AT3G49250) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452192.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |