| Id Trinity | TRINITY_DN48492_c2_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_363709 |
| Sequence | GTAACAAACAAATATTTTGCAGTGCCGTGAAAGGAAGGGCGGAAAATAAAGTACACGAAGCTCACGGCGCGAAATAAAAAAGAGAGGAGGAAAAGTTGAT AAAAAAGCAAACAAAAACTCACCAAACTTAAAAAGCAATTTCGCTCTTATCCTAATAATTTCTTAAACACCCAAAAAAGCAAAATCAAAACCCACCAATC TCTTTTTTCTTCTTCTCTTCTTATCCTTATAAAGAGAGAAGAAACATCGAGATTGAGATTGAAAATAGAGAATGGTATCAATCATCATTCATCACTAAGA AACAGTTGTTCAATGTTATTTGATAGTCACAAATCTGCTTCATCTTCAGCGTTGTTTTAATCTTCCTCTATCTCTCTGTCAGTACATGAGAATAGGCAAA AAGGTTTTAATGAAGCGAGATGTATTTCTTTCATGCTCTGTAGCATTGCTGTGTTGATGAAGAGATGGAAACAGGAGAAAGCAACACTAGTAACGCGAGG GGCATTATATCCGAGAATTCTCCATGGTTCAGTCAATTCCGAAATGCATGCAATCCTTGGATGGCAAGGTATGCCTATGCCTTGATTTTTCTAGTGGCCA ATCTGTTGGCATGGGCTGCCCGAGATTATGGTCGAACTGCTTTAACAGAAATGGAAAGATTAAAAGGATGCGATGGTGGAAAAGACTGTTTAGGTGCTGA AGGTGTTTTGCGCGTGAGCTTGGGTTGCTTTATATTTTATATCATAATGTTTTTGTCAACTGCTGGCACTTCTAAACTGAACCAAGCTCGAGATAGGTGG CACTCTGGGTGGTGGCCAGTCAAAATTGTTCTCTGGGTCGCCATGACTGTCATCCCATTTTTACTCCCTTCTGCTTTAATTCAGATTTATGGGGATGTTG CGCATTTTGGTGCTGGGGTTTTCCTCCTAATTCAACTAATAAGCATAATCAGCTTCATAACATGGCTGCATAATTGCTGCGAGTCTGAAAAATATGCAAC AAGATGGTAAGATATTTTCAGTTAAAGCACTATTAAAACACAGGCTGCCTGAGCACGAACAATTTGCTTGAGATAATTGTAGCTATATAAAAGTTTTAAT TGACTTTTTAACGTTTTAGCAAGTCATTTCCATTGGTTTAGAGGAAAGAAGAAAAAAATTCATTTAACTTTTAAAATTCACTTTAGCCTCTTATAGCAGA GCATTAAAAGTACTCCAGAGTCTATAGTGGGATAACAAGTTATTTTGTGATTGTTGGTTGTTGCTATTCAAGCTTATATACACACCAGGTCTGATATGTG GCCAGCAATGGGTAACCAACAATCCTAAATTTATGCTTCTTGTGTGCATTATCGTAAAGCTCTGATAGGGCGACACTCAAGTTGGTCAATTTATTTAGGA TACCAGTGATAAGATTCCATATTTTTTGTAAATGTTTGCAATGATTATCAATTTCCATGCAGCCACATCCATGTAATGTTGTTTGCAACGATTGCATATG TCATTTGTTTGGTGGGGATCATTTTGATGTATATCTGGTATGCACCGAAGCCATCCTGCCTCCTCAACATATTTTTTATTTCCTGGACTTTAGTGCTTCT TCAACTCATGACAAGTGTGTCTCTGCACCCAAAAGTGAATGCTGGCATTCTAACTCCTGGGCTGATGGGGCTTTATGTTGTCTTCCTTTGCTGGTGTGCT ATTCGAAGTGAACCAGCTGGAGAAAGCTGCATCAGGAAGTCAGACTCTGCACCCAAAACAGACTGGTTAAGCATCATTGTAATATTTATCTTTTCTTGCC TAACTGAAATTTCAGCCTTCTTGGAACTGCTCTTTAAACTTGATAGTTCTGACATGTAAAAAAGAGGGAAGCTTAGTGCATGAGGCTCCCACCTACTTGA TAGTCCTTAACTAACCGTGTACGCAGCCCTACCCCTGTAAGCAAAGAGTTTGTTTCCAAGATTTGAAACCATAACCTCTAGGCCACAAGACAAACAACCT TACCATTCCACCGAGGCTCACTCTCTATAGTCGACTTCCTACCCAGTTATATGCACATTACCATTTTCATATACATATTATCCATTAAAATAAGTGCAAG GGAGAATGATCCTTTTCCAGAAATCATAATTCAAATTTGTCAGTTATGAAAAGCTTCAAGCACATTATAAGACAACTTCTTACGGTTTTACGTATCATAA TATCTTTATGAAGGCTTAGCAACTATAATGTCTACATTTTTGAACTGTGTTATCTCGATTTCTCAATTAGTTTCGGTTAAACCAGAATCCTCAAGGAAAA CATAAAGCATACACAATGCCTTAACACACAAGCAATGAAAACTACACCCTGCAAACTCCCCTGCTTCTTGGCACTGCTGTTGCAGAACTTCACACACACA CAAGAAGAAATTGTATGATCTTGATGAATAGAAAAGAAGATTGAGAAAAGAAGATTGAATGAATATACTTCACTGCATTTGAATGATTATATATGAGAGA ATACAATACAATACAAATGCTCTACTCTTTCAAAATACAACAATAGCCATTTATAGAAACTTAACTACAACAAACTTAACTAACTTTCTAATAGAGGAAG GTTCCCTTAACAACTTTCTAGAACTATAAGGCTGAATCTTAACATTTTTCTTCAACAGTTTCTTTATTGTTGGTTGATGTGTGACAAACTGACTGACAAT TGCAGAGCTTTGTAGTTGCTATATCAGCAATCGTTATTGCAACGTTTTCAACCGGCATAGATTCTAAATGCTTTCAGTTTAGGAAGGATGACAAGCCGCC AGCAGAGGATGATGTTCCATATGGTTATGGCTTCTTCCATTTTGTTTTTGCCACAGGAGCAATGTACTTTGCTATGCTATTGGTTGGATGGAATAGTCAT CACTCTATGAGAAAATGGACAATTGATGTGGGCTGGACCAGCACCTGGGTCAGAATAGTAAATGAATGGTTGGCAGTCTGTGTTTACTTATGGATGCTTG TTGCTCCAATCATATGGAAGTGCAGACAAACTGGTTCTGCTTGAGCACGTCAGAAAGATACGGTTCATAGTTTTGATGTTTTTATTGAGGATTAAGATTT TCAGGTAGTCCCATCTCTGCTGGATATGTAGTGGACTCTTCCAGCTCAGATAGGAAAAAGAATTGCAATTGCATCATGCCGGAAATTCTGAAGCAAAAGA AATGGCTCTTTTGTGGAAAGAAGCAATGGTTCTGGCAAAAAATGTGCATATAGTGGTTGGATTTGCTCTATATGCATGAAGATATACAGCCCTTTCACTC CATCCATGGTATATAAGAAGCAAGGATACATTTTACTTGTACATGTATCAATTAGAGCATAATGTAATTTAAAATCACTTAATAGATGCTAATTAGAAAT TTTCATTCTTAATGTCATGTTATTTGTCATAGTGAGAGTTTTGATGTTGATTCCACCACGTTAAGATGGCATGTTTTGGTTGGTTTTTTGTGCATTTTCT GCTGGAAAGGGGTCGGTTTTCTTGCAAACTGTGAAATCTAATTATATTGGTACTTTGGTAGCAGAGATAGCATTGCTTTGCCAACTGAAAGAAAGTTGTC CAGTTCGATACGAATCTCCTTTGGAGATCCTTGAAGAATGACTATTCTAGTGGATAGCTTATGTGTTTGAACATTTATGAGTAAGTTTGGTAAGTGCTGA AAATGTGAATAGTAGGGCCTAAGATAGATTAGCAGGTTTTAGAAATGGTACTTCCATTGTTACTTCTTGGAAAAAATAAGAAGATATGAAGAAGAATTGA ATAAGAAACTTTTACATTGAGAAAGAAGAGAAAAGATACATCAAAAAGATTAAACTAAACAAGCTATGGTAGCCATATATATAGCAACCAAGAAATAAAG AAAACTAAGCTAACCAAACTACTCTTAACTAATTTACAACTAACTTGTTAACTAAGAAATAAAGAAGATATGGAGAAGAATTGAATAAGAAACTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161503; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_363709
| Blastp | Probable serine incorporator from Dictyostelium with 25.71% of identity |
|---|---|
| Blastx | Serine incorporator 1 from Pongo with 35.14% of identity |
| Eggnog | serine incorporator(ENOG410XP7K) |
| Kegg | Link to kegg annotations (DDB_G0281099) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424389.1) |
| Pfam | Serine incorporator (Serinc) (PF03348.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |