Ll_transcript_363624

• Id Trinity: TRINITY_DN48494_c2_g1_i11
• Name Transcript: Ll_transcript_363624
• Sequence: CTTTCCTTGTAATCTTTCATTTTTATTCCTTCTATTGATATTTTTCTTCTTTGGTTACTAGAAGCTGAACATTGGAATTTCAGTTTCCAATCTGACATGT TTCCTATGTAGTGGTTGTGTCAGAAGCATGAAGAGCAATGTGAGCATGAGTTGTTGTTTAACAGGAAAAAAAGATCTTCATGTCTCTCCAAAATCAAAAG TAATTTCCAAAAAACCATGCTCTAAAGTAGTTTTTCCTGATCAAGTTGCAGAAATAAACTGCACAATTCTAAATTGCCAAGATGTTTCCACAACTACACT TGTATCCCCCAACGATGTTGCAAGTGGTGAATCCATCAATAGAAAGGAATTGCTGAATAAAGAAAACTTTGATTCTCAGCAGCAGCAATCATTTTCTATC GATTCTTCTGCTTTGGGAGAAGTGGAATCAACCAACCCATCTACAGCAGACATCGAAAGAATTGTTTCGCCTGATTTTGAGCCTAATGATGTCCATTCTC AACATTATACTCAACGGGATGCCGGAAGAATTGGTGATACTGACATGCCCGAACTAAGTGCTGATGAAAGTGATGATGGAAGAAGCATATGTGGTTTTCA AACATTTGATTTATCAGACTTTTTCATTTCCGACATGATCATGACAAGCTTACCCTTTGATGGAGATTATTTTGATGATGATTACTTTGAGATCATCAAC TATCTTTCTGATTATAAGTCTTATGAGCCAGCCGTGTTTGATGTTCCTTACCCGAACATGGTCCTGCCTGCCCTTGAAGATGATGTTAATGTTGGCAGTA CAAAAGATAGCATACCATGTGAGGAATCCGTGATGGTTCAAGAAAATGATAGTTTATATTCGGCATTATGTCAGACGAAAAGATGTTGTAACCAGGATTC TGGTAAGACAGAATGCTTTGATCCACAATTGTTTCTCAAGAATTTCCCGGAACTATCAGATGTTGAATCAACTGATCTGCCCACCCAAATACCTAAGCAA TCTCAAGGAAGAAAGTCAGTAACCCTAGTGCTTGATTTAGATGAGACACTTGTTCATTCCACACTGCAACATTGCGACGATGCAGATTTCACTTTCAATG TTTTCTACAGCATGAAAGAGAACACAGTATATGTAAAACAGAGGCCTAATCTCCACACATTCTTGGAGAGAGTGTCAGAGATGTTTGAAGTTGTCATTTT TACTGCCAGTCAAAGCATATATGCAAAACAACTACTTGATATATTGGATCCCGATGGAAGACTTATTTCACGACGAATGTATCGGGAGTCGTGCATTTTT TCACGTGGAAATTACATAAAAGATCTTACTGTATTAGGTGTCGATCTTACAAAAGTTGCCATAATTGATAATACGCCCGAGGTTTTCCAGTTGCAAGTGA ATAATGGTATTCCTATAAAAAGTTGGTATGATGATCCATTGGATTGTGCACTTATGTCACTACTTCCATTTCTTGAGATCCTTGCTGATGCTGATGATGT CCGTCCAATCATTGCAAAGAGATTTGATAACAAAGAATATAACAGCTCTTCACATTTTTATGCCTAGATTTTAAGAAAATTTGGCCAATAATTAGAATTC TAAAGTCTCATTTCCATGAGTTCTTGCAATGAATTAACCTATACAATAAACTATTGAAAGGTAGTTGTAGCAACCATCTCTCTTTTTATCCTTGTACAGT TAAGTTTGGTATTATTCAGTTGGAGTGGAAATGGAATATTATCACATTATGAAATATAGTTCTCAAAGTTGTATATTAAAA
• Tissue: pods
• Gene name: LI_gene_161517;
• Additional information: details;

Expression of Ll_transcript_363624

FPKM

• PAB: 0
• PNAB: 7.3
• PS1: 11.1
• PS2: 5.9
• PS3: 27
• PW1: 9.4
• PW2: 5.2
• PW3: 5.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_363624

• Blastp: CTD small phosphatase-like protein 2-B from Danio with 47.57% of identity
• Blastx: CTD small phosphatase-like protein 2-B from Danio with 47.57% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (323089)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444375.1)
• Pfam: NLI interacting factor-like phosphatase (PF03031.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;