| Id Trinity | TRINITY_DN48494_c2_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_363632 |
| Sequence | AGCCAACCTTGTTTGATGTACCTGACCACCACATGATCCTGCCTGCCCTTGAAGATGATGTTAATGTTGGCAGTACAAAAGATAGCATATCATGTGAGGA ACCTATGATGGTTCAAGAAAATGCTAGCTTGTATTCAGCATTGTGTCAGACGAAAAGAAATTTCAATCAGGATTCTGATGTTAAAAATGACTCCGATAAG ACAGAGTGCTTTGATCCACAATTTTTTATCAAGAATTTTCCGGAACTAACAGATGTAGAACCAAATGATCTGTCCATTCAAATACCGAAGCAGCCTCAAA GAAGAAAGTCAGTAACTCTGGTGCTTGATTTAGATGAGACACTTGTTCATTCCACTCTTGAACATTGTGATGATGCGGATTTTACTTTCAATGTTTTCTA CAACTTGAAAGAGAACACAGTATATGTAAGACAGAGGCCTAACCTCCACACATTCTTGGAGACAGTGTCAGAGATGTTTGAAGTAGTTATTTTTACTGCC AGCCAAAGCATATATGCAAAACAACTGCTTGATATATTGGATCCTGATGGAAGACTTATTTCGCGCCGAGTGTATCGAGAGTCATGCACTTTTTCACATG GAAATTACCTAAAAGATCTTACTGTATTAGGTGTTGATCTTACAAAAGTTGCCATTATTGATAATTCCCCTCAGGTTTTCCAGTTGCAAGTGAATAATGG CATTCCTATAAAGAGTTGGTATGACGATCCATTGGATTGTGCACTGATGTCATTACTTCCTTTTCTAGAAACCTTGGCTGACGCTGACGATGTTCGTCCG ATCATTGCACAGAGATTTGGTAACACAGCATGATTTGGTAACACAGCATAAATTTCTCATCAGTCCAAACATCTGTTCCTATTTTATGTCTAGATTTATG AAAAATTGCCCTCTAATTAGTCTTAGTTCCCTTGTCCTCTCTCAGATTACATGTACAGAGTGCACTGCTTCTCTTGAAAAGTAGTTATAGCAACCATCTC TCTTTTTCTTCTTTCCCTAGTCCTTGTACAGTTGAGGCTAGCTACTATTCTATTCAGTGGAAGTGGACATGAAATGTTGTAATATTATGGAATATTGTTC TTAAAGTTGTATATTTTCATTGTGTTCCATATGAAGGGCCAGTATATTGTTTATGTGCTAATTGAAATGGTAATAACAATCTACTTGACTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161517; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_363632
| Blastp | CTD small phosphatase-like protein 2 from Homo with 49.28% of identity |
|---|---|
| Blastx | CTD small phosphatase-like protein 2-A from Xenopus with 46.41% of identity |
| Eggnog | CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190) |
| Kegg | Link to kegg annotations (51496) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464319.1) |
| Pfam | NLI interacting factor-like phosphatase (PF03031.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |