Ll_transcript_363608

• Id Trinity: TRINITY_DN48494_c2_g1_i6
• Name Transcript: Ll_transcript_363608
• Sequence: CTTCGATGATGATAACTTTGAGATCATCAAGTTTCTTTCTGATTATAAGTCTTATGAGCCAACCTTGTCTGATGTACCTGACCCGAGCATGGGCCTGCCT GCCCTTGAAGACGATGTTAATGTCGGCAGAACAAAAGATAGCACATCATGTGAAGAACCCATGATGGTTCAAGAAAATGGTAGCTTGTATTCAGCATTGT GTCAGATGAAAAAAACTTGCAATCAGGATTCCGATGTTAAAAATGACTCCGATGACACAGAGTGCTTTGATCCACAATTCTTTATCAAGAATTTTCTAGA ACTATTAGATGTAGGATCAAATGATCTACCGGGCCAAATACCGAAGCAGTCTCAAAGAAGAAAGTCAGTTACCCTAGTGCTTGATTTAGACGAGACACTT ATTCATTCCACAGAGGAACCCTGTGATGATGCAGATTTCACCTTCAATGTTTTCTACAACATGAAAGAGAACACAGTATATGTAAAAAAGAGGCCTAACC TCCACACATTCTTGGAGACAGTGTCAGAGATGTTTGAAGTAGTTATTTTTACTGCCAGCCAAAGCATATATGCAAAACAACTGCTTGATATATTGGATCC TGATGGAAGACTTATTTCGCGCCGAGTGTATCGAGAGTCATGCACTTTTTCACATGGAAATTACCTAAAAGATCTTACTGTATTAGGTGTTGATCTTACA AAAGTTGCCATTATTGATAATTCCCCTCAGGTTTTCCAGTTGCAAGTGAATAATGGCATTCCTATAAAGAGTTGGTATGACGATCCATTGGATTGTGCAC TGATGTCATTACTTCCTTTTCTAGAAACCTTGGCTGACGCTGACGATGTTCGTCCGATCATTGCACAGAGATTTGGTAACACAGCATGATTTGGTAACAC AGCATAAATTTCTCATCAGTCCAAACATCTGTTCCTATTTTATGTCTAGATTTATGAAAAATTGCCCTCTAATTAGTCTTAGTTCCCTTGTCCTCTCTCA GATTACATGTACAGAGTGCACTGCTTCTCTTGAAAAGTAGTTATAGCAACCATCTCTCTTTTTCTTCTTTCCCTAGTCCTTGTACAGTTGAGGCTAGCTA CTATTCTATTCAGTGGAAGTGGACATGAAATGTTGTAATATTATGGAATATTGTTCTTAAAGTTGTATATTTTCATTGTGTTCCATATGAAGGGCCAGTA TATTGTTTATGTGCTAATTGAAATGGTAATAACAATCTACTTGACTTTAAAA
• Tissue: pods
• Gene name: LI_gene_161517;
• Additional information: details;

Expression of Ll_transcript_363608

FPKM

• PAB: 0.2
• PNAB: 1
• PS1: 6.4
• PS2: 3
• PS3: 4.6
• PW1: 4.2
• PW2: 1.5
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_363608

• Blastp: CTD small phosphatase-like protein 2 from Dictyostelium with 49.75% of identity
• Blastx: CTD small phosphatase-like protein 2 from Dictyostelium with 49.75% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (DDB_G0290365)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461453.1)
• Pfam: NLI interacting factor-like phosphatase (PF03031.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;