Id Trinity | TRINITY_DN48498_c0_g1_i35 |
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Name Transcript | Ll_transcript_362161 |
Sequence | ATTTGAGACTCGGTCTCCCTCTACTTTGATTCTTTTCTCTTTTATTCAACACACAAGTTGTGGAATCCGAAAACAAACTCCATTTCCAACTCTTTCTTCA TTCAGTTAAGCTCTGTTCTCATTTCCGTAGCTAAATTTCTAGGGTTTACTTCACTTCTTCAATCTTCCAACTTCCCTTCATCCTCAGATTTGAATAAAAC TAATACATCATCTCGATTCTATTTTTGAATGCATTTTTCGAGCAATTTCACTTTGCTGTTCCTGTTTCTGTATTTTACTCTCTGATTCAAATTCAATTAA CTTTTCAATTTTTGAAGTAAGCATAAGCAGAGATGGCGAGTCGGTTGAAGGAAGAAGAGAAAAACGAACGCATGATTCGAGGACTTCTCAAGCTTCAACA CAATCGTAGATGCATTAACTGCAACAGTTTGGTTAGTAAGAATAACACGAGAACTCGCGAGTGTTTTATCAATGAAATTGAAATTTATGCATGCTTAGAC CTCATTTATTGTGTTAGATTCACCTTCGATTATTTAGAAGTTGCTTTAAATGGATTTCTACTTAGTTCAAATTTGAAAATAGGTGGTTTTAAGTTGGATT CGATGTTGCGGTTATATTGTGTTTAGTGCAATTGCGGATAATTGCTAACCACAGTGTAAAACCTGCATTCAGGGAAGACCATTGAACTTGAAATTAATGA CACTGTTTTTTTATCTGGTGTTATATTATAATGTACTGGAGTGTGGAGAAATTCTAGCTTGCTCATGGAGTAGCAATAAATGCATGATTAGGAAGATCTA TACCAATGATTTAAGTTGGCTATTTTAAGCTTTTATTGAAACGTGCTTAAAATCAATGGTGAAAATCTTCCAAGAGCATCCGGTTTATCGTTGCTCCATG ATTATGCTAGATTTTCCCGGAATGTCGTGTGCAGCAGTAGTGATAAAGAAAGCAAAAGCATGATATAATTTCACATGTTTTTGGCATGTGAATCATTAGA ATCTTTAATTTAAGTTGGTGGTTGAAAATTAGAGTACGGAATTAGATATTGTGATTACTTAATGTGAGGTCTTACTTAATTAGTAACATAATCTTGACGC GTGGCGTTTTCATTTTAAATTTTGGGAATGCACCATTTCATTTTATGAAATTGATTATCATTCGGCAAAACTACAGATTAAATATTATCCTCAAATTTCA TGCATTTGTCTTTGGGAAACACTGGTTTTTTTGTGCTATAAGTGCATATTTGGCATCATAAACTCTTGGAGATGAATATTTATTTTGTATTTGAATAATT TTATATTAAAAAAAATAGCTAGATGAGCTTATTCGGGCAATCATGCTCTTATTGTTAGTATTAAAATGAAAAATAGGCTGTTGAGAATTAGTTGTTTCAC TTGTTGAGATATTTCAAATTTGCTTAAACAGTTGTTTGAAGAGCACTTCTGATGAGTACAGGGTCCATTTGGAACTAAACTATTGTTGACTATATTACTG AGCATTTTAGATTTAAATCACAAAACAAGTTCTAAATAAATCTTTTGGTCCAAGTCCAACGAACAAGAATGAAAACATTTCTGATGCTACTTTAATCATT CAGTTTCAAGGGGCTAAGTTAATTTTTGTAATAATCTAAAAGGCCTCCAAGGAAGGTTTAGAATATCTACTTCTATAGTACAAATTGGGAGATTATTATG AATAATTTAAAGTTTGCTATTGAATTATTTAAGGATGTGTTTAAGTTGCATGTTCCTTTGACTTTGGAGTGATATTGGGATATTTTTAAGAATGATTGCA TGTTTCTATTATAGGGCAGTTAACATGTAAATTTGGTCAACTGTCAGATTCTGTATCAACCATTGTTAGAGATAGATTTCATTTCATCCTTGACAGACAG AACAATGTTTCCATTTGTATCTAATAACTTGCTTGTAGCCTGCAGACTACCAAAATTGCAAGGATGATAACAATTAACAGCATCAAGCAACTATTGATAC TTCTTTAGATTCCATTAAAAAAAAGAACCTTTAACGATGAGATAAATTTTAATCTTTGCTTGAATTCTTTTGTTAGGCATATTTGTCATCATGTTGTAGA CTTTAACTCATGTGTTGTTAATCTCCAACCACCTTTCAGAGCATTACGATTGCATTCTTCTTAACCTAGGAAGGAAACTTTGGCATTTGACATTGACAGG TGTAGTATATTACTTATTCTCTTTTCTCTTTTGGAAGGGACCACAATATGTATGTACAAACTTCTGGACGTTTATTTGTGCAAACTGTGGTGGAATACAT CGGGAATTTACACATCGAGTAAAATCCATATCAATGTCTAAATTTACTTCACAAGAAGTTAAAGCACTTCAAGAAGGAGGGAATCAGCATGCAAAAGAAA TTTATTTTAAAGAATGGGATGCCCAACATCAACCTTTCCCTGATAGCAGAAGTGTTAACAGGCTCCGTGACTTTATCAAGCATGTTTATGTGGATAGAAA ATTCACTGGAGAGAGGACCTATGACAAACCACCGAGAGTAACAATGGATGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGACGAATCAGGGAGGA TCTAAAAGTCCTCCATATGAACGTCAATATGATGACAGGTCTAGTTCGGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATA AGAGAGGTTCTGGTTACCCTCCTGTAGTCAATGATTGGCGTCATGAAGATCGTAGAATATCTGAGGAAAGCCAATCTCCTGAGCGAACCAATGACTTGGA TTCTTCAAGCTCACCTGTGGTCCGTCCTGTTAGAGATATTTTGGGAGAAAATATATCACCTCTTCGGATAAGTGAACCTCCTAAACCAGACAGTGGAGTA GCTGCTTATGGCTCAGCACTGACACAGAGAACTGCATCTTCCAGTAGCTTGACATCCAACAATGCAAACCCAATGCCAGAAGATGTTAAGCTTGAGACTA TAAAGAGCCTTATTGATTTTGATGTTGATCCTGAACCTCCTGCTGCTCCAGCAATTTCTCAAGCTGAACAAACTAATATGTCTCAACCTGCTGTGCAGCC AGCAAATCCCAGTGATGACAACTGGGCCTCTTTTGATGTTGCTCCTGGGGCAAAAGCAACTCCAAGCCCTGCAAATATAAATACTCTTGAATCTGTGCTG TCTCAGTTGTCAGTGTCAGCATCCTCACCTGCTCATGTTCCTGGAGTCCAAGGTGATTCACATGTTGCAATAGCTATTCCCAGGGGCAGTATGATGACAT TACCAAGAACTGATGACTTATCTGTTACACCTGCAGGAGCTGGTCCAGCATCATCTTTTACTTCTGCTTCTGGACCTGCTAGGGCTAGCAGTTTGTCAGC TTTCCCACAAATTGGTGCTTTAGCATCATCTCCTGGGTTTACAACAGTATCACCTCTTAATAATTCAGGACAGTGGGCCAATTTTCAGCATCAACAACCA TTGTTCCCTGTCACTGTGAGTCAGTCTACTACTCAACAATTTACACCACCATTTGGTAGAGCTGTGAATAATCAGCCCTGGAATGCACCTTCTGTACCCA TAGTACAAAGACATCCAAACACACCAATGCCACGTGCATACCATCATGCCTCAAAGCCCGCCAATGAGACTATATCCAGTGTTGTTTCACAACCTTCCAC TGTAGAAGTAAATCCAAGTGCAAGAAAAGCGCTCCCTGAGGATTTGTTCACTGTAAAATATTCATCCTTCCCTGCTCCAGTTCGAGGTTGGCAAATAGGT CTTCATCATGGCATGGGTATCCCAATGCAATATAATAACGTGGTGCCCGTGGCAAGTTTTCTGCAGCCAACAAGATCAACGAATCCATTTGATATTGGCA GTGAGCAAACCCCAAATCAAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCTAGTGTAGCGCCTTCTGTTTCAATGCACCTTTCAGG CCTGAGTTATCCATCAAATGCCTGGACTCTGCCTCCATCATCATCATATGTATCAGTCCTGCCTGCACAAGCACAAGCACAAACTCATGCATCAGCTTTT GGACCAAGGGCATACATGGGACAACAAATGCCAACCAACATGGGACAACACGTCCCACTTAACATTCCAATACCAAGGCAAGAAGTTGGTAATTTTGGTG CTGGGGGAGCTGCTATTGGCTTGTCAAATCCATATCAACACCTGACAGGAAATTCATCAACCAATCGCAACCCTCATCCTTTCCCTGGAGGAGGGAACCC ATTTGGATGATGTGAAAATTGTCCAAGTGGCCTTGTAAAGTTAAGCATCAACTTCTTCCTCCCTGTACAAATAATGGGTAAGTTCTGTTTATATTGTTTC ATTTAGAGTGATTCACACATGAATAATGTGCAATTTTAGGTAAGGCTAGGGTCGAAGTCAAATATTTGCGAATGGGTATTACAGGACTGAGATAAATAGT GTATGAATATGAAAGGGGTGCAGGTGACCCTTCGTGGAGGCATTTTTTGTCTTTTTGGGTGCACCACTGTGTTCATTTGTAATTGTATAGTAGATGGGGT GATAATGTGTGCTTATTTGGTGGCCCCTAGTTGTATTCTTTATTCCTTTTACTAATATTATATGATGTATGATTTTGTAATCTCAATTTTGTGAGGATTT ATGTTATTTTGACAAGTTTTAAGTTGCCATTTGGTTTCTAGACAAGTTTTTTAGATGCTTCTAGACAAACAATAAAAAAGTAAAATAGAAATATTTTGAT TTGTGTATGAGTTGTTCAAATGAGACTATTGGGTGTTTCTTTTTGTTTAAGTACATGAAATCAACTTAGTG BLAST |
Tissue | pods |
Gene name | LI_gene_161562; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362161
Blastp | Probable ADP-ribosylation factor GTPase-activating protein AGD14 from Arabidopsis with 47.06% of identity |
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Blastx | Probable ADP-ribosylation factor GTPase-activating protein AGD14 from Arabidopsis with 55.73% of identity |
Eggnog | ArfGAP with FG repeats(ENOG41122WA) |
Kegg | Link to kegg annotations (AT1G08680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436655.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |