| Id Trinity | TRINITY_DN48502_c5_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_338756 |
| Sequence | TTGTCATTAGACTCTTTTGATACCCTGAATGATGTTTCCCCGTTTTTTGGTTTCCTATGCAGGCAGCTGGTGCTTTATCAATAAATATCGGAAAAAGACC TAGGGATTTATTAAACCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCCATTAGCAAGAAAGAATCTCGTGAGATCAGTGCTTTA TTTGGTATCACGGTGAAACAGGTGCGTGACTTTTTTGCTAGTCAACGTTCAAGAGTAAGGAGACTAGTTCAGTTGTCAAGAGAGAGGGCGTTAATATCTA ATTCTTGTGAAGAATCTCATGATGGACAGATAAACTCTGATGATCCTATGAGACCAATAAATCCAGTTCCCTTGAACTCTGTTGGTCCCATAAATGCGGA GGAAGCATCTTGTTCAACACAAGAAGCAACTTTGTCTGGTCTAGATGGCTTAGATAAACAGTTTGTTGATAACATTTTTAGTCTAATGCAGAAAGAGGAA ACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGACTGTGCAAAATTTTGTAGTATTGTTGTGGTTTTTGACCAGAGGTGGTGTTATGATTTTAG CAACTTGGTTGAGTACAGCAGCTATTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTAAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCCTCCCGC ACAAATATCAGCTATATTGCAGAGTGTTAATAGACTGCGGTTCTACAGAACTTCAGACATATCGAACAGGGCAAGAGTTTTGTTAGCAAAGTGGAGCAAA TTACTAGCAAGGAACCAAGCAATAAAGAAACCTAATGGTGTTAATTCTTCTAGTGATGGTAAAAGAGAAACAATGCTTTCTCATAGTATTGGTCAAATTA TGGGATCTGAATCATGGCATTCAAATGTTGATGTTCCTGAAGATATTCTTGCTCTCTCAAATGAATGTTCCGATAATCTCAGGAAAATGGAACCACTGCA AGTTTTGAAATTGTTGCCATCTTGCTCGGATGATTCAAATAAGAAGCCTGGCCTTGGTTTATCTTCATCGCGTATCCTTGGATCCCTTTTGTTGATTTGG TTATATCTTTTTTCAATTACTTTCTTTTTCTTCCCTTTTAAGTTGTGCAGAGTGCTGATCAACAAAACCGTTTAAGTAGGACATCTCAAATCACAGATAC AGGAAATTAAATGCTTTAAATAAAACTTTTGAATGGTACTCTGGAGTGATGATGGAAGGCTCATTAATTTTTCTTCAACCAAGCATAACTACTATTACTT TGGTGTGATAGCCAAATGATTTGCTCTCATCACTTCACTGACTTGGAAATCTTTCTATACACACTAGCTGCTTATGTTACTTTATCTCTGGCTATTCTAG ATTGGTATTCTGATTATATTGAAGTGTTTGTGACTCAAATTCCTTGTGTGCGACAAATTTCTTTTGCTGCTTGGTACTGTGTAGCTTCTCACGAGTTCTT TTGTCACACACTGATTTCTTCAGCACTGGAAAATTGCCAATTGTTGAAAGTTCAGTGTCAATACTTGATCCCGACATAACTTGTGCTGTATACCTGAAAT AATCTGGCTCAAGGATAGAATTAAATTGCCTGAAGTTCATGCTAGTTGTTGTTTAGGGATGCTAAATGTTGGTTATATCTCTTGTCATATTCTTTAACCC CTGACAGAATTCCGCGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGTCAAAAAACAGGAAGCAGAAGCCCACAGGCAGCAACGACAAGGCCTGTTA CTCAAGGCCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCACTATTTATGCAGAGTAAGTATGGGAAAACTGGTCCTGCAAAAGAAAG TAAAGGAGCAAAGATTAATGGTCTGAATAAACCTCAGACAAATCAGGCAAGTATTTCAGCTTGCTCTTCTAAAGTTCCTCTTCCACTCAAAATTGAAGAA GACAAGAAATCTCCACCGCTTCCCTCCAAAATCACTAGTAGGTCGGAAGCTTCTTATTCTAACCTGAAAATGGATTTGAAGGAACCTCTCTGGGAGAAGT GCAAGAGGGTGCAAATCCCATGGAAGACTCCAGCAGTGACTTCATTTTTTCCGGCGAAAAGCTCAATTGCTGTTAAACTCCATTAAAATACATTAACCAG GATCCAGAACCTTCATTGTAGACGCGACAATAACATTGCCAGATGCCCAGATGTGCAACCTCTATGCCGTGGTTCCTCCGCCGCATCACACCCCACCACT GTGGTTAGAGTAGTCCCCAGATTGGCACCACTATGAACAGCCCCCACTGCCACTAGACAATAACTGCTCTGCTGCGGCTATAGCTGAAAAAAACGGACAC TCATTGGAGAAGTGAGAAGAGAGAGAAACTAAAAAAATTCATGTGTTCAATAGATTTTTTTGATGAACCCGCTGTGGGAAAGGCTTGGGTGTTGTTAACG AATTTTTAAAAGACTGTCAGTGTTGGATGGTGCAACGTATGAACCACTTGAAACCAAAATATAACTCAAATGATGAGTTCAGTGGTTTTTCCCATTACTA TCTGAATTTCATGTAAAACAATTAGAGATGTATTTTTCCCTTACACCTTTGCCATGGCTTATGGGAATAAAAGTACATATGTGGATAGATTTGGTTTGGG CGTGATCCAATATTAATCTAATGTTGTGGCATTGTGTTGTAATGACTGAAGCAAAAAGGAATTTCCGTGCTTTGCTGAATCAAAGCAGGATTCTGATTTA CTTACCTATAGTAGTGACTTACATTGTATGAGGTGCTTCAGGCCAAATAAGAAGTTGCTATTATACCATGAATTTCTTAAAACATTGCCGGAGTTAATTC ACCATGGGCATTCTCGAGAACGCTCTTATCTTCTCCATATGATATTAAACGCCACAGTCAAATATGTTACATGTCAAGTATCTTTTATGTTTTAATTTGT AACCACAATCACTGATATGGGTGGATAGTTGGTTTTCTGTCTGTGGTGTGAAGGACTGTGATTTTACTGATGCCGTCTTTGCATGTTTTACTACAAGACA GCATTGGCTATGGAGTATAGTTGCAAGTGTTGAGCAATGTTTGAAGGTTTAAACTCAGTGGATATGTAATCACAATAAGAATTACAGCACTGTACTTGTC CATTGTAAGACTTGATTGGCACGATAACAAGGTCTATGACTTATTTTTTTGTAAGTGTAACAATATTGAGGGACTATTAACAGACTGCGGCTGTTCATTT TCTTTTGGTAACTTGTGTGCTTTACCCTGTTGTATGGCTGTACCCTTTGAGAATGAGTAGTGTATTTATCACCCAAACTCCAATGTTTGGAGACACATGA AAGGCTGTGTGGTCATTTCATTTGTCATTTTAAAGGAATTTAACCAGCCACATTTTATTTTATCCTTCACTAGAAACAGATTTTATTTTCCCTCTCATCT GGGGCTATGATTATTTATCCACTAGGTTCATAATGGAAGCTGGTAAATCTCGGAATATATTATTAAAATGGGCAATTAATCTAATGGATATTTATCAGGT TAACAAGACACTGATAAGTTCTTTGCTAACCTTAAAAAGTAAAGCTTTGATATTGAAAATTTTCTGTCTTTTTGCATTCTTGATTTGGCTGCAGTGTGTT ATTCCACCGTAGACAGAAAGCATCTATTGAATCCTCGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161598; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338756
| Blastp | Homeobox protein LUMINIDEPENDENS from Arabidopsis with 58.02% of identity |
|---|---|
| Blastx | Homeobox protein LUMINIDEPENDENS from Arabidopsis with 58.51% of identity |
| Eggnog | homeobox protein(ENOG4111YQX) |
| Kegg | Link to kegg annotations (AT4G02560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440851.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |