Ll_transcript_337144

Id TrinityTRINITY_DN48506_c3_g2_i11
Name TranscriptLl_transcript_337144
SequenceCAAAAAAAAAGTTGTCATAAATGGGCCATTTTTCTTTTTTTTCCAAGGTTCAAAGATTCTGTTCTTTCTCACAACTGAACTATGTGCTATTTATCTGCAT GCTTTGCTTGATGTGAAGTGAAGAACAAATCAAATCTAATGAGCTGAACCCATTTCCCACACTCTCTTCCATTTTCCACTTCTCATTTTATTTCTCTCAT TCAACCAAGTCCCTTCACAGAAAGTTTGAAACTCCAAAACCCTTTTATGCAAACCAAATCTTAAGTGCCCAGATAGATTCACCACCACCCTTTTCTAAAG CCAAGTTCTTTCTCAGATAACTTGATTTAACTGTTGAAATATGTCAGTTATTCCGATTTCGCTGAGCCATCTATCAGTACAGCTGTGAAAGTTAAAAGAA AAGGTGAATCACCTATTGGTTATTCTGATGCATTACCTAATGTTGTATGGGCTCCTGCATCAGCAGTCAAGAGATTTTAGTTTACCACTTATTGCTATTC CTATCTTTTGTCCACTCAAATAAGCATTTCTAATCTGTCCTGTTTGACATGATTTCTCTACTTGTAGCTCAGTTGTAATTAAAATAACACACTCTCTCAT CAAGACACTCTATCCCACCCTTGGTGGGAAGACGCGTGCAACTATGTACAACACAAATTTCAGCTCAACGATATATGCGGTTAGGTGTAAAGAGACATTT ACTTTATCTTCCAATGGCTACACAAATTTCTCGTATGAAAGATTTGATAGAAACCCATCACATTGTTCATCATGTTGTGGTTGTTGTGATTGCTGTTCAT TCTCCACTTACAAAGTGCCTGTAAAGTCCAGTCTTCTGAATGGGCTGAAGCAATCTACTCTCCTTCAACTTTCAGCTTCTAGAAGGTTGATTTTGGGTGG TGGAGACCTGTACTTTTCCCGACTACCATCTTTTGATCTCCATAGAGGTTGTTCTGAGCTTAACTATTCTGTTCACGAGATAACTGTTTGCAATAGAAGT ACAAGGAGAACAAAGGGAAGATGTTTGTGTACGGCTCCACGAAAAGGAAGGGAAATATGCCACACAATTGATTCTGATGATGTTGAATCAGTTCTCAGCT TATTGAGTGAAGAAGCAGATAAGGATTCTAGCAGTATCAAATTGAAGAGCGTGTCTTCACCCAAAATAATGGAAGCAGAGAAGAAAAGAAAAAATGTGAT CAAAGAGAGAAATTTGAGTTTAAGTAAGAAAGTAGAAGCAAAGAAGAAAGGAAATTTGAAGCTACATGAGACATCCACTATAGACTTGAGAAGCGAGAAT GAAAAACCCTGCAAAGAAAGGGAAACCTTCAATAAAAGTGAGAACCATAGGAAGCGAAGAGATGTTTCTAGTTGCTCATCTTATTACTCACTTTCATCAG GAGATCTTGCAAGTGACCTGGAAGTTCAATATAAGCATGATTTGGAAGAATTATCAGTAGTATATGAGAAAGATTGTGCAAATCACGAGGGACAAGTAAA GGATGAACTGAACAGGCAAAGAAATTACTCACAGAAGCTGCATTATGTTCCAAATCAGGAAAGGACTGCATTTAGTGCTAATAATATTGATTGGAACCTA AGGAAGAAGTCTGAAAAGAAACCGACTGACATGACTATGCAAGAAACATTATCCACAAAAGAACACAAAGATAAGCATTCAAGAGCATTTCGAACTCATG AATCTAGTTATGGAAATACATCTATTTCACGCAAGCAAGTCGAATGTGAGGAAGATAATTTATCTTTTGTCAAGGATTTGGATAAGAAAATGGAAAAGGC ATATATTAAAGCAAGGGGGAAAAGAAATCACCAATCTACAGATACACAAGAGTCTGGTTATGATGAAGTTGAAACAACTTTGGCTTCAAAGAAGACATTC AGTGGCAGGGAAGGGAACCATGAGATATCAGAAACATTGTTACGTGAAAGAAGTGATGAACATAAAAAGTTTGTTGGATCTAATTCTACCACAGGAAAGG AAACTTCAGAATCAAAGAGGACATTCAGTGGCAGGGAAGAGAATCCTGAGATATCTGAAACACTTTTACACGAAACATGCGAGGAACGTAAAAAAATTGT TGGTACTACTTCTACCATTGGAAATAATGTAATAAATAGGAATTCCCAGAAATATATGGGAAAAACAAAAGTTGAGGACACTGATAGAAACTTAAATACT CGAATGAAGAATTTGGCAGAGGAAAAAGTTACAATTTTGAGTTCTGTTCAGGGAGTAAAGGAGCAACAACACCAAAAAGGAGAAAAGATCGTTGCACAGG CTAAAGAGAGCAGAAAGCCTCAGCGATTTTCTGAAGTATCACAAGTTCATGAGAGTAATGTAGACGATACATCCATTGTGACATCCAGAACTAGAATAAA TGACTGGGGAGGGAATTCAAACTCAAGCACAGCTGCCAGGGGTACATGGCACCAAATAGATGATAGGACAAATCAGAGTATTCAACACGGGAAAGGGTTT GAACATGTCAGCACCTTATCAGAAGGGTATGCCAGTGATGAAAAGCAAGTTTCCAGTTCTCAAAGAATTTCTGGGAAGGTGAGGTTCATCCCAAAAAGTA AATCAATGTCAGTTGTTAAAACCAGAGAGAGCTATTGCCAAACTGATGAAAGGATTACAAATTTTGACTTGTACAGTGAGGGCCAAAGACCAATGATCCT AGCAGTTTCTGATGAAACTGTCTCAAGAGAGGAAGCCAACTTCCATGGATCGTTGAATTTGGTTTCCGAGGCTGGAAAACGTGTTAGATTGGCATCAGGG GACGAACAGAGTTCAGAAGGAATGCTGACCCCTTCCTCATCCAGATTGATGGGTCGAAGCTCAGTACATGTTGAACTCAATGCTGAAATTGAAAATCCTG GGATCATCATTGAAAGTTCAGATAGTGGCTCATCTGCTATGTATGACAGTGCCAGAAGAAATCCCATTTTTCTTTCTGGATCATACTCTACAGATGGAAT TCATCAGGCCTATAGTGAACCTTCTAACATCATAGATCTGGAAGGTGGTGCCCTTGGTTCAGCTGATCGTTTAGAGAAATCATCCAAACAGTTTGTTGAT GAGTTTGTTGAGAGAGTCCGGCATGAAGTCACCACTTCAGAAACACGAGAGCCAGATGTTACTGGAAAAAGGTTGACCATTGAAGATGAAGGAAATCAGA TCTTTAGTTCAAGGCAAGAAGGCACTCAAAATGAGTCACAGTTGAAGGAGCGTGGTTCTAGCCATTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGA TGAAATGTGGGATGTAAATGAACCATATGTTGAGCAAAGTCTTATAGCTGAAGAACCAGAGATCGGCAAGGAAACTGAGAAAACAATTCTCAGTAGAACT GGGAGGTCCATGTGGAGTATGATTGCAGATGTTGTTCGATTACGTTGGGGCTCACGTACTGGTTCCTCCACTTCAGTTGGAAGATCAGGTGAGAGAAACT CGCCAAACAAGTCTGATACTGAGACATGGTTTTCAGGGCAGGAGCATGAGGAAACTAGTAAGAGTAATGTAATAAAGGAAACAAGTGTACTACCACAGAC CATGACTTCATCAAAGCCAATTACATCTTATACCCAAAGTGACGGAGACGTGTCTGACACTAAAAGACTGAAGGACAATGGAAAAAATCTTGAAGTTAGA TCATCTTCTCCAAATGCATTGGAAAGTGGATCAACATCATTAGGTGCCTCATATGCTTCTGGTGAGGAACATGCTAACTGGAGTGAAGATGGAAAAGATT TGAAAGTCAGTACTTCAGACATAAAAAATGTGGAATTCCCAATTCCGTTGCCTGCCAGAGGGCCTCCTTTTGTTGGGAAAATTGTAAATGTTGGTGGATC TGACATATCTGGAAGTGAGCCGATTGTGCCAATCAAAGAACCTGTTGCTGCAGTGCAATTTGAATCGTCTGGCTTAGGGGAAAAGGATGGAGAGTTGAAG CAAAGGAAGTTTCAACGGAACACTCAAGTATTGAGAGATAGGTTTGATGATTGGGAAGAAGCCTACAATGCTGAATTTGAGCAGCGGAGAGTGGATGAAA TGTTCATGAAGGAGGCACTTTCGGAAGCTATGAAAGCTGCTGATACATGGGAGGTCCCTGTTGGTGCAGTTCTTGTGCAGAATGGAAAAGTTATTGCACG GGGATGCAACTTAGTAGAAGAGTTACGGGACTCCACTGCTCATGCAGAGATGATTTGTATCCGAGAAGCTTCAGGTCTTCTTCGAACATGGAGACTATCA GACACTACACTATACGTCACGCTTGAGCCCTGTCCTATGTGTGCCGGAGCCATTCTTCAGGCAAGAATAGATACTGTTGTGTGGGGAGCTCCCAATAAGC TTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAGTTCATCTGAACCAAGAAATATACCACCTGCCCCAGTTCATCCATTCCA TCCAAAGATAAAGATAAGAAGAGGAGTCTTGGCCTCGGAATGCGCAGACGCAATGCAGCAATTCTTTCAGCTGAGAAGGAAAAAGAAGAAAGAAGAATCG TCAAATGACCAATCTTCCCTTCCTATTACTCACCACCACCCCTCCAAGTTTCTTAACAAGATTCATGACATCTTTCATGTAATGTTTTGTTTGTAAAATA AAATTACAGACACACATTTTCCTCATGTTTTAAATGAGCAACTGAATGAAACTTTCAAACATGATGTATGGTCTTAGTGAAAGGCACAATGTTCAATTTC TAACGTTATATTCATTCAGCAAAGTTGTACTGAACAATAACTTAGACGTTTCTATACCAACCATTGTTGTCAACTTTAACTTCACGTTACAGCTTTGAAA GTTTCTTTAGTAGGTATTGTAGGAATAACATTATTTGTACTATTATCTATATCAATTCTCTATGTCACTCCTTTTATTTTATTTTTACTTTGTTACAGGT GAAACCAAAC BLAST
Tissuepods
Gene nameLI_gene_161628; 
Additional informationdetails; 

Expression of Ll_transcript_337144

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_337144
BlastptRNA(adenine(34)) deaminase, chloroplastic from Arabidopsis with 35.71% of identity
BlastxtRNA(adenine(34)) deaminase, chloroplastic from Arabidopsis with 35.02% of identity
Eggnogdeaminase(COG0590)
KeggLink to kegg annotations (AT1G68720)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019460745.1)
PfamCytidine and deoxycytidylate deaminase zinc-binding region (PF00383.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;