| Id Trinity | TRINITY_DN48513_c3_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_338408 |
| Sequence | CATGATTATAACAGCCCTTGGGGTTTAATTGGAGAAATAGTGTCACTAGTAACCTCATCTGTGTTCTTTGAAGCCACCTAATCTACCACATACAAAAGCC TGGTCCAACTTGTTCACATTTTTCAATACGTTTAGTTTGGTAGCTTACTTGCTTTGACTGAACTTACCGCAGCACTCCACGGTTTCTTTGCAGGTTGATA ATCGGTTGTATAGTTTCAATGGCTGACTCATATACTTATAAATTTCCCTTATTTGCAGTCATCAACACTCAGTGGAATAATTTGGTACAACTTGTCATCT GTTGAAATTGGGCTGTAGTAAGTTTAAATTAAATTTTCAGTTTGTTCTCCGTTTATAGCTACATCGTTGTCATTGTTATTATTTAGCATGTTTCTTCATG TTTGTAATTACATATATTGATCATCAATATGAACCGACCCCACCTAGTGAGATTAAGGCTCGGTTGTTTTTGTTGATCTTCAAAATGTTCTCAGATATTG GTGCGTTTACTTTTGTAGACTAGTGGATCATTATATGGTGCCTTGATTGGCTCTTTGTTGGCCTTCAATATTGCTGACTTCATAGGTAGAAAAAGGGAGC TGATTGCAGCTGCGTTAGTGTATCTTGTTGGAGCCCTTGTAACAGCAGTAGCTCCTAATTTTCCTGTATTGGTGGTTGGGAGACTTGTATTTGGCCTAGG AATTGGACTGGCAATGCATGCTGCTCCGATGTACATTGCAGAGACAGCTCCAACATCAATACGTGGATTACTAATCTCTTTGAAAGAGTTCTTTATAGTA CTTGGGATGGTTGCAGGATATGGAATAGGTAGCCTTTTGGTAGACACTGTATCTGGATGGCGGTATATGTTTGGAGTTAGTAGTCCTTTGGCACTAATCA TGGGAATTGGAATGTGTTTGCTCCCAGATTCTCCTAGATGGCTACTTTTATGTGCTATACAGGGGAAAGGGGATAGTAAGAATTTGAAAGACAGGGCTAT TCATTGTTTGTGCCAGCTTCGAGGTCAAGCTATTGCTGACTCAGCTCCTCAGCAAGTAGATGAGATTCTGGCAGAGCTATCTTATGTAGGTGAAGAAAAA GTTACATTTGGAGAATTGTTCCGAGGGAAATGCAAGAAAGCCCTCGTGATAGGAGGAGGATTGGTCTTGTTTCAACAGATCACAGGGCAACCAAGTGTGC TCTACTACGCTGGATCAATCCTTCAGAGTGCAGGATTCTCTGCAGCATCTGATGCAACCCGGGTCTCTATTCTCCTTGGCCTTTTCAAGGTAGACTTTAT TTACTTATATTTATAATAAATTATACATAAATTTGTATTAAAAGGTCCTACCATGTTTTGTTTGGTGTTGACCCAGTGTCCCATCACCCTATGAGGAGTA AGAAACTAATTCCTTTGGGGTGTGTGGTTGCCTTTCTAGCAATTTTCACTCCCAAGTATCAAACATTAACCTTTGGCTTTGTACGAGACTTGGGAATACA GTGGGGCCTTATACCCTTGGATCCACTCCTTTTGGTTTTGTACCATGGCTTTTAGTTTCATTAATTATGCATGGTGAGGGTTTTGTATGAAGTACAAATT TCAATTGTTGATTTGTACTATGTACTTGTGAAGTTATGGCTCAAGGCTTTAGCTTTGAAATGTCATAACTGATTTGCTATATCCACAAATTGTATATGTT TGTGTGTTCCGAAGTCCGAACCCCACCTCATGGAAAAAGTTTTTGGTTGCTGTTGTTCATGTGTTAATAAATTTCATCAAATCAAAGAGAATTAAATTGC ATAATTTTCAATCAATATTTGACATTGATTAGCACTGCTTTCTGTATTCTATTTTTTAATTGATTTTTCAAATGAAGAGTCATGTTTGAGTTCCACTTAT GTCTGCGCTAAAGAACTTCATACCAGTAGCTCTGAATAATTTATTTTACGAACAATGTCTTTTCCTTTTTCCATCTATACATGTAACGAGTCTTGGATTC GAAAGGAAAAAAGTGAAGAAGGGTGAACGTATATTTTTCCAGCTGCCCTTGTCTTCCCTGCCCCTCTTTCTCGCTTTTGTATTAATTTTGTTTCCTAGTA AAATGTATGAGCACCTTCCTATCCAGTTTTCTTTTAGCTTTTCCAATGTAACTTCTTTCTGTTTATTTTCTAGTTAATTATGACTGGAGCTGCTGTTGGT GTTGTGGATAGACTCGGGAGGAGACCATTACTACTTGGAGGAGTTTCAGGGATGGCTATCTCTTTGTTCCTTCTGGGTTCATATTACATTTTCTTGGATA ATGTAGCAGTTGTTGCTGTAATTGGTCTTCTGTTGTACGTAGGCTGTTATCAGATGTCTTTTGGTCCAATTGGTTGGCTTATGATATCGGAGGTCTTCCC CTTGCGCCTAAGAGGTCGAGGACTTAGTATAGCTGTTCTTGTCAATTTTGCTGCAAATGCCCTTGTGACATTTGCCTTTTCTCCTCTGAAGGTAATTAAC TTGAGATCTTGAACCTGTTTGTTTTCAACAATTGGAGACTATAGACTTGCCATATTTTTCTGTATGTGTCATCATTAATCAGATGATCACCATATTTCTG AACTATCTTATCTTACAACATCACAAGTAAGCGTATGATTTTTTCGCAATTCCTTGGCCATGTTTGTTGGTTAAAATTTGCGTTCTTTCAAATGCATTCG ATATTTTCTCTTTATCTCCCCTTCTATTTGGTTAATTAGGCTGTTTAGAGAAGGGAGTTTTGTTGTGCCATTATTGTTTCCTTATTACTTGCCATGTGTT TGGTTATGCGGTTAGCAGGCCTCAAAATCACTTAGCTTTTGATTAAAGGAAACAAAACACCCTTAACTTTGTATAAAGACATCATTTTCAACTAGCAATT CAGTGATCCTAATAGCTTAATTGACAATGCTTGTTTTTTTGTTTGTGTTTATTTTTTTATCCACAGGAATTACTGGGAGCAGGAATCTTGTTTTACATAT TTTGTGCAATAGCTGCAGCATCTCTTGGATTCATATACTTCATTGTGCCAGAAACCAAGGGGCTTACCCTAGAGGAGATTGAGGCCAAATGTTTATAGTC AGTCACCTTGTTACCTCTATAGATATCTGGTTACAGTACTCTGTTGTAACTTGTCTTAGACAAGAATGAATTTCTGTAATACAAATTATATTGTATAATT AACATTAGGCACTAATGAATTTCAGTTTACTTAAACTTTGTTGAATGTTTACTATGGTGGGATGTATCAGCCATATCAAACACAAACTATGTAATATTCA CCTTAATTCTCTGTACTTCAATTCATTATGTTTATATAATTTTTTAGAAACATATTTTTATAAATAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_161670; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338408
| Blastp | D-xylose-proton symporter-like 2 from Arabidopsis with 75.77% of identity |
|---|---|
| Blastx | D-xylose-proton symporter-like 2 from Arabidopsis with 73.75% of identity |
| Eggnog | Transporter(ENOG410XNQK) |
| Kegg | Link to kegg annotations (AT5G17010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454337.1) |
| Pfam | Sugar (and other) transporter (PF00083.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |