Ll_transcript_339081

• Id Trinity: TRINITY_DN48516_c2_g3_i1
• Name Transcript: Ll_transcript_339081
• Sequence: CAGGGTTGTTATACATTGCCTATACGGGTAAAGGATGCTTTTCTAGGAAACTTGTGAAATTCCTTTTATAAGCTATAATAAATTGAAGTGAAGTTATATA TATCAACATATATGTATGTGAAAGACATTTTCAGTCAACTCACTAAAAAAGAAGCATAATGGCTATGCCCATTCAAGTTCAAGTAAAGGTATGGATGTTT GTTGGTTTTGTTTCATCTGTTGTTGGATTGCTTTGTTATGCTCTCAGTTCCTCCTTCAACAAACTATTTGGAGAGTGGAACTTCTTCAAAATCTTTCTCT ATGTTATAATCAGTTTCACCATCTTCTTCATGACTTTGGTTGCAAAGGTATGGCAACCCTCAATGAGTATCTTGTTCAAAACTCATATGGCAATTTTACT CTTGTTAGCTACTTCTGTGTACTCAGTTTTCTTTGATAAAGCTGTGAACCAAAAACCAGATGTATATATCTTGATCTCCTGTGCTGCTTTTGCTGTTATG TCTCTCAGTTTGTCAAAGCAAACTCAATTTGGATGTGAAGTGGATCTTCAAAATTTTTTCTTGGGATGTTTAATTGTACTACTTATGAAGAGAAGTATGT GGTTATTTTTTGTTGGAGCAGGTTTTAGTTATTCCCTTATCATTATTAGTTCCTGGACAGATATCACACCCCAAATTGAGGATTTTGAAGTAAATGTCAT TGAAGTGGATTCACATCACTTGGTCATTGAAGTGGATTCACTTAGACATCAGGTACCAGCTAAGATGCACGGATCGTTGGATAAAAACTGTGAAGAAATT AAATCTTTGTTGAGAATGGAGTCAAAAGAAGTTCAAAAGATTGGTATTTGGGGCATGGGTGGCATGGGTAAGACAACCATGGCCAAAACTGTTTTTGATG AACTGTCTTCTCAATTTGATTGTATTTGCTTTCTGGCAAATGTACGTGAAGATTCAAGTAGGTATGGACTTAACTATGTTCGCAAAAGACTTTTTTCCGA GTTACTAGGGATAGATGTTGATATTGACGCTCCCAGAGTACCCTCTAATGCTATGCGTATGCTGGTGAATAAGAAAGTTCTAATCGTATTAGATGATGTG AGTTCATCAGAACATGTAGAGAAATTGATTGGAGTAGGGCATGACTGGCTAGGTGCTGGAAGCATAGTCATTTTAACAAGCAGAGATCGGCATGCGCTTC TGAGCGCAAGAGTTAACGTGTTTTATGAAGTCCAACCAATGAACTTTCAAGACTCCCTTGAACTATTCAGCATATATGCCTTTAACCAAACCCATCCTGA AACAGAATATGAGGAGCTATCAAAGACAGCAGTTGGTTACGCCAATGGCATGCCCTTAGCTTTGGTAGTTTTAGGATCATCTCTTCACTCCAAAACTAAA AGTGGATGGGAAAGTATACTAAAAAGACTAACGATGATTCCCGAACCAAATATTCAGGAAGTTATGATATTAAGTTTCGATGAATTAGCAGATGCAGAAA GAGAAATATTTCTAGACATTGCGTGTTTTTTTGAAGGGCGTCATATAGACCAAGTATCAAGAGTATTAGATGCTTGTGGTTTCTTTGCAGATATTGGGAT TAAAATCCTTTTAGACAAGGCTCTTATAACTATTGATTCATACGGTTGTATTAAAATGCATGGCCTCTTACGGAAGATGGGTTGTGATATTGTTTATCAC GAATCTATCAAGAACCCTGGAGAACGGAGCAGACTGTGGAACTCTCAGGACATCATGGATGTGCTGACAAGTAATAGAGGAACAGATGCTGTTGAAAGCA TGTTCTTGGATATGACTCAAATTCCTAATCTACACTTAAGCTCATATGCCTTCAAAAAGATGCCAAACCTAAGATTACTTGCTTTTGATAGCAGCAACAG TTCAGTGATTAAGAATCCTGTGAGCATTCCGGAGGGTCTTGAATTGCCTGCTAACTTACGATATCTGCAATGGGATGGATATCGATTGAAGTCTCTACCA TCAATTCGGTGGGAAAAGCTTGTTGATCTATCCATGCCACACAGCAACCTTCAAAAACTTTGGGATGGAGTACAGAATATGCCGATGCTAAAGAGAATTT ATCTTCCTTTCTCAACGCTTCTGATAGAGTGTCCAGATTTTTCTGGTTCACCAAATCTTGAATCTATCTCATTTCGTGGTTGTGAAAATTTGGGTCAACT TCATCCATCTACTTTCACTCTCCAAAAGCTTAAAGAATTAGATGTGAGTGAATGCACATTGCTTACCAGCCTTTGCAGCAAAACTTGTTCACCATCTCTC CAAAGATTGTATGCTGTGGGATGTACCAATCTCCAAGAGTGCTCAATCACAACGCCTGGCGATCAATGCAAAACTCATTTGCATATGAACTCTGAACTCA GAGAGTGATCAAGCAGCAAGGACAAAGGTGTGTGCAGTGCCAAATGGGGTTGAGGGTTTGGCATCATCATCTATGTTCTTATCAAATTGCTTATTGGGTT CTTTATTCTCAATTCATGATTATGAGATCATTAGGTTCTGTTGGATATCTTACTTTTCTGCATAATATAGTAGTAAGTTGAATTTTTATTTGATAATTAG AAATAGTGAGTTAATGCCACATTTCTGAGATTAGTGTGATTGAAAAGTTACCTTGTCTACTGGGTCTGCCTGGAGTTCATAAACTGCAATAAGATCTTTT GATCATGTGATAAGATTTATTTCCTGTAATGCTTTTATAATAAATGGTAGATTTAACTAGTGTTGTGTTATTGATTAATCAATTTTCCTAATTTAAGAAG TTAATGCTCTGCTCTGTTGTGCTG
• Tissue: pods
• Gene name: LI_gene_161691;
• Additional information: details;

Expression of Ll_transcript_339081

FPKM

• PAB: 4.1
• PNAB: 6.9
• PS1: 7.9
• PS2: 2.1
• PS3: 5.1
• PW1: 12
• PW2: 8.8
• PW3: 5.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_339081

• Blastp: TMV resistance protein N from Nicotiana with 34.72% of identity
• Blastx: TMV resistance protein N from Nicotiana with 34.77% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446042.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;