Id Trinity | TRINITY_DN48520_c11_g1_i1 |
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Name Transcript | Ll_transcript_338700 |
Sequence | GGGCCGGATCGGGCCAGCCTATATTTTGGCGGACCAAAGACGGGGCGGGCCGGGCCGGGCTAGCCCATATTGCCTCCCCTAGTTCCAAATGGTTGAGATC ATTAAAATAATACAATTTAATTAAATATTTATATGAAAGACAAGTAGCATCTTTGGGATCCTCATGCAAGTGTGCCAGTATACTTTCTAATTTTTCTCCC TTCTCTTCCTTTTCTTTGGGATACCACATTGTCTCGTTCTTGGTCCCTCAACTACAGCTCAGGATGACTTTTTTCACTACTACCTTGATTTAGCTTCTTA TTCATGTCAATTGTCTTGGTCAATAGCCATGGTCCACATTGTCTTGTCTTCCCACTTGGATTTCATGACTAGTATTGCACCCTTTTAGGTGATCATTTAG TTCCAATGACATGAGAAGCATCCATGTATAGTTTCATCAAAATCATTTTATAGATATTGAAAAAAAGATATATGCACCAACAACGTAAGAGTTTTTTTAT CTCATTACTGCATCAATCATCATTAAAATTTAATGTTAGATGATGTACTGTCTGTACATAAATCTTTACACGGACGGTACATAGATATTTTACTCAGATA TTTGTCTCTAGCTAAGGTAACCATACCTCATAATTGTTTAAGGAGCTCATACTTAGAACATGCATCATTATTTATAGTACACAACTTGTGAAAAATAATA AGTACTGATATAGGCTTCTATGTGAAGGAGCTTCTTTTTCCCACCTTGAATTTTATAAGAAAACCTTAACTATGTCTATTGCAGCTGAGGATATTGAAGC TGGAATTAAGACAAAGTTTCAAATGGAAACTACTCTGCCTATATATTTAAAGTTCACTGATGTGACCTACAAGGTAGTGGTTAAAGGCATGGCATCAAGT GTGGAGAAGGATATTTTGAATGGGATCAGTGGTTCTGTAAGTCCAGGGGAAGTTTTGGCTTTGATGGGTCCCTCAGGAAGTGGAAAAACAACTCTTTTAA ATCTTCTTGGAGGTAGGCTAAGCCAGCCTTCAATTGGTGGTTCTGTAACTTACAATGACCTTGCATATTCCAAATCCCTCAAGAGCAAGATAGGATTTGT GACACAAGATGATGTACTGTTTCCTCACCTAACTGTGAAAGAAACATTAACCTATGCAGCTCGGCTAAGAATGCCGAAGACGTACACGAAAGAACAAAAG GAAAAACGAGCCTTAGATGTCATCTACGAGCTTGGCTTGGAGAGGTGCCAAGATACTATGATAGGAGGTTCCTTTGTTCGCGGAGTATCCGGTGGAGAGA GGAAGAGAGTTTGTATTGGAAATGAGATCATAATAAACCCCTCTCTTTTGTTTCTTGATGAACCAACATCT BLAST |
Tissue | pods |
Gene name | LI_gene_161720; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338700
Blastp | ABC transporter G family member 22 from Arabidopsis with 84.18% of identity |
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Blastx | ABC transporter G family member 22 from Arabidopsis with 84.18% of identity |
Eggnog | (ABC) transporter(COG1131) |
Kegg | Link to kegg annotations (AT5G06530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428049.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |