| Id Trinity | TRINITY_DN48521_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_339311 |
| Sequence | ATTTAATCCTTTTTTTTTTTTTTCTTCATTAAACTATTCATTGTTTAAATTTTTCTTTTCTCTATTTTGTTCATTATTATTATTATTATTAGCCGTGCGG GTAACCCTTAACTCCTTAAGTATATCCATCCCCCAACCAAGCACACAACAAGTAACAAAACCCAACCCCTCTCCCGCCATGAACACTCAAGTTATCCTCT CCCACACAGTCCCACCTCGTTTCCCATCTTCTTTCTCACTTTTCCCTTCCACTAAAACAAAACCCACCTCTCTCTCTTTTCTCTCATTTTCTCTTCTCCA CAACCACTCTCTTCATTTCCCTCTCTCTTTCTCTTTCAACTCCCCAACCTCCACTTTCCGTACTATCCAACATGACGGCGATGACGACGACGATGAAGAT GTTGCGGCCGACGATTACGAAGACGAAGAAGAAGAAGAAGAATATGAAGTACAAGATGATGATGATGATGGTGATGACGTTGCAGCTGACGATTACGACG AGGGCGAAGCCTCCGATGGTGACGCGTTCGATGCTCCTGCGAGCGATGGAGCTTTCAAGTGGCAGAGAGTTGAGAAGCTCTGTAATGAAGTTAGAGAGTT CGGCGCTAACATTATCGATGCTGATGAACTCGCTTCCGTTTACGATTTTCGGATTGATAAGTTTCAGAGGCTGGCGATTCAAGCTTTTTTGAGGGGTTCA TCGGTGGTGGTTTCCGCTCCTACGAGCAGTGGGAAGACTCTGATTGCAGAGGCTGCTGCAGTGGCCACGGTGGCGAGGGGGAGAAGGATATTCTACACAA CTCCGCTCAAAGCACTCTCCAATCAGAAGTTTCGCGAATTCCGGGAGACATTTGGTGACACAAATGTTGGCCTTCTTACTGGTGATTCTGCCATCAACAA GGAGGCTCAGGTTTTGATTATGACTACAGAGATATTACGCAACATGTTGTATCAAAGTGTTGGGAATGCTTCTTCTGGAGGTGGACTTTTTCATGTTGAT GCGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGTGGTACAGTGTGGGAAGAGATTGTTATTTATTGTCCTAAAGAAGTTCAACTTATTT GTCTGTCAGCAACCGTTGCAAATCCAGATGAGTTGGCTGGCTGGATTGGCCAGATTCATGGTAAAACAGAGTTGGTAACATCATCAAAACGTCCAGTTCC ACTAACTTGGCATTTTTCTATGAAGAATTCCTTATTACCACTTCTTGATGAGAAAGGAACACGTATGAACAGGTACTGTTTGGGATCCTTATTATATTGC ATTTATTCAGTTTGGTTGATTGTTCTCACATATATTCTATCTCAGTTGGTATTGGTTATTAAAAATAACAGTAGTGGCAATTAGAATCACATTTTGTCAT TGAGCATCATGAAGTTTGATAACATCTTTATTTGGTACATTTTACTTTCCAGTGATCTTTTATATTGAATGTAAGCCACTTACTACTCTCACTCTGCTAC TGTGTGGAAGAGCAGATAACATCTAATTACATGATAAAACTAATGTATTCAATTTTGAAATTTAGGGCAGTCAATTGTGAGTGCTGATTCTTTGTAACTT CCTCAATCATAGATCATAGTGACAATAATAGTCAATAAATAGGGGTGGGTGACAATTACTATTGTTAGTACTTGCTGCATTGAACAGTGATAAGAGGGCT TGGGTTAACCGGGATCTGGCTTCTCTGAAGTGAATGGCAGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_161745; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_339311
| Blastp | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 87.5% of identity |
|---|---|
| Blastx | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 87.5% of identity |
| Eggnog | helicase(COG4581) |
| Kegg | Link to kegg annotations (AT1G70070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445516.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |