Ll_transcript_339312

Id TrinityTRINITY_DN48521_c4_g1_i2
Name TranscriptLl_transcript_339312
SequenceATTTAATCCTTTTTTTTTTTTTTCTTCATTAAACTATTCATTGTTTAAATTTTTCTTTTCTCTATTTTGTTCATTATTATTATTATTATTAGCCGTGCGG GTAACCCTTAACTCCTTAAGTATATCCATCCCCCAACCAAGCACACAACAAGTAACAAAACCCAACCCCTCTCCCGCCATGAACACTCAAGTTATCCTCT CCCACACAGTCCCACCTCGTTTCCCATCTTCTTTCTCACTTTTCCCTTCCACTAAAACAAAACCCACCTCTCTCTCTTTTCTCTCATTTTCTCTTCTCCA CAACCACTCTCTTCATTTCCCTCTCTCTTTCTCTTTCAACTCCCCAACCTCCACTTTCCGTACTATCCAACATGACGGCGATGACGACGACGATGAAGAT GTTGCGGCCGACGATTACGAAGACGAAGAAGAAGAAGAAGAATATGAAGTACAAGATGATGATGATGATGGTGATGACGTTGCAGCTGACGATTACGACG AGGGCGAAGCCTCCGATGGTGACGCGTTCGATGCTCCTGCGAGCGATGGAGCTTTCAAGTGGCAGAGAGTTGAGAAGCTCTGTAATGAAGTTAGAGAGTT CGGCGCTAACATTATCGATGCTGATGAACTCGCTTCCGTTTACGATTTTCGGATTGATAAGTTTCAGAGGCTGGCGATTCAAGCTTTTTTGAGGGGTTCA TCGGTGGTGGTTTCCGCTCCTACGAGCAGTGGGAAGACTCTGATTGCAGAGGCTGCTGCAGTGGCCACGGTGGCGAGGGGGAGAAGGATATTCTACACAA CTCCGCTCAAAGCACTCTCCAATCAGAAGTTTCGCGAATTCCGGGAGACATTTGGTGACACAAATGTTGGCCTTCTTACTGGTGATTCTGCCATCAACAA GGAGGCTCAGGTTTTGATTATGACTACAGAGATATTACGCAACATGTTGTATCAAAGTGTTGGGAATGCTTCTTCTGGAGGTGGACTTTTTCATGTTGAT GCGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGTGGTACAGTGTGGGAAGAGATTGTTATTTATTGTCCTAAAGAAGTTCAACTTATTT GTCTGTCAGCAACCGTTGCAAATCCAGATGAGTTGGCTGGCTGGATTGGCCAGATTCATGGTAAAACAGAGTTGGTAACATCATCAAAACGTCCAGTTCC ACTAACTTGGCATTTTTCTATGAAGAATTCCTTATTACCACTTCTTGATGAGAAAGGAACACGTATGAACAGGAAGCTGTCACTCAATTATTTACAACTT CAAGCTGCAGGAGCTAAACAATACAAGGATGATGGGCCTAGAAAAAGGAATTCACGGAGACGAGGAACTCACACAAGCTATGATAGTGATGGTAGCATGT TTGAGCAACGTTCTCTTTCAAAGAATAACATAAATGCAATTCGTCGTTCCCAAGTAGGGCCCCGGAATCAGTCCTGATATATACTGCTTTGTATTTTATG AAGATTATTGTAGCCATATTTTCCCTATCTTTTTTATCTTCTAAACTTAATATTGTGATGGTGAAAGTGAAATGAGGATATCTTGCCTATATTTATATGT CAAATAAAAATAATCACTTGACACTGAATATGGAGTTTGGATTGTCATTCACGCGCTAAAGAGCACACTCATGTTTTATGTAAGTTAAAGAATATACTTT AATGAGCATCATATGCTTTGATATGGAGTTAAATCTTATTTTTTTTTCAGGTTCCTCAAGTAGTTGATACGTTATGGCATCTTCAGTCTAGGGATATGCT GCCAGCTGTGTGGTTTATTTTTAGCAGAAAGGGTTGTGATGCAGCTGTGCAATACCTTGAAGATTGCAGACTATTAGACGATTGTGAAACAAGTGAGGTT GAGCTAGCCTTGAAGAGGTTCCGCATTCAGTATCCTGACGCTGTCAGAGAAACAGCTGTGAGAGGACTTCTGCAAGGGGTTGCTGCACATCATGCTGGTT GCCTACCTTTGTGGAAGGCATTCATAGAAGAACTATTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACAGAAACCTTGGCTGCTGGAATCAATATGCC TGCTAGAACAGCTGTCATTTCGTCACTTAGCAAAAGAAGTGACAGCGGACATGTCTATTTAAGCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGA CGCAGAGGCATTGATGAGCGTGGTCATGTAGTCCTCATCCAAACACCTAATGATGGTGCTGAGGAGGGTTGCAAGGTCTTGTTTGCTGGACTTGAGCCTT TAGTGTCCCAGTTTACTGCCTCATATGGAATGGTATTGAATCTTCTTTCTGGTGTAAAAGCCATTCGGTCAAATGAACCAGATGAAGTGAGACCTTCATC AGGAAGAACTTTAGAAGAAGCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAACGTTATGCTGGCTGCCAAGGAAGAAATTAAAAAA ATTAAGAAAGAAATTGAATTGCTGATGTCAGAAATCACTGACGAAGCCATTGATAGAAAAAGCAGGAAGGCTTTATCACAGTGGGAATACAATGAGATCA CGGAGTTACAGGAAAATTTAAGGGCAGAAAAACGTGTTCGGAGTGAATTGCGGAAACAGATGGAAGCAAAGAGAATTTCTGCCCTGAAACCTATACTGGA AGACCCTGAAAGGGAACATCTACCATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTTCAACATTCAATTCCTGCAGCATATTTGGGGAAGGTTGAC TCCCTAAATGCTTCAAAACTCAAGATCATGATTTCTTCAGATGATTCTTTTGCGTTAAATTTTTTAGATGAAGAGCCAACAGGTGTTACTGATTCTTCAT TAAATAAAAATCTTGAACTATCATATCATGTGGCTCTTGGTTCAGATAACTCCTGGTATCTATTTACAGAAAACTGGATTAAAGCAGTATATGGGACAGG CTTTCCTAATGTTCCATTGGCTCAAGGGGATGCTCTACCTCGAGAAATTATGAGTACTCTCCTTGATAAGGAGGAAATGAAGTGGGATAAGGTTGCTCAA TCCGAACATGGTGGTTTATGGTTCGTGGATGGATCTCTAGAAACATGGTCTTGGAGTTTGAATGTTCCTGTTTTGAGTAGCTTATCTGAAAATGATGAGC TACTTTTAAAGTCTCAAGTCTACCAAGATGCCGTTGAACTTTACAAGAACCAAAGAACTAAAGTTGCACGCTTGAAGAAAAAGGTATCCCGTACTGGAGG GTACAAAGAATATAACAAAATCATAGACGCTGTCAAGTTTACTGAGGAGAAAATCAAACGGCTGAAGACTAGATCAAAGCGCTTGTCTAATCGTATAGAA CAAATTGAACCCGCAGGATGGAAAGAGTTTATGCATGTTAGCAATGTCATACATGAAACCAGAGCTTTAGATATTAATACACATGCCATCTTTCCACTTG GCCAAACCGCGGCTGCAATTCGAGGAGAAAATGAGCTTTGGCTTGCAATGGTTCTTCGCAATAAAAGTTTACTGGAACTAAAACCTGCACAACTTGCTGC AGTTTGTGCAAGTTTAGTGTCGGAGGGTATCAAAGTCCGACCTTGGAAAAACAACAGTTATATTTACGAGCCTTCTGCAACTGTAGTCAATTTCATAAGG TTGTTGGATGAGCAAAGAAAGGTCCTGATGTCAATTCAGGATAAACATGATGTAACAATATCTTGCTGTTTGGATAGCCAATTTTGTGGCATGGTTGAAG CCTGGGCTTCTGGTTTGACATGGAGAGAAATAATGATGGATTGTGCTATGGATGATGGTGATCTAGCTCGCCTCCTTCGTAGGACCATTGACCTTTTAGC CCAGATTCCGAAATTGACAGATATTGATCCTTTGTTGCAGCGCAATGCAAAAGTTGCATATGATTTCATGGATCGGCCTCCAATAAGTGAGCTTGCTGGG TAATAGTAGTGTCTTTGTTCTCCTGTCCTGTGCTCCATTTGTAAATATTATTGTTGTATGATTAATTTCCCTAAATTATTTTCTTCTTCACAAAACCCAC TTTTCAGTTAACTTAATTGTTTTTATTATTTTGATCTCTCCTCTTCTTCTTTTTTGCGCATTTTGGTATGTTAACGCAATTTCTGTTAGTGTATTAGTCA CTCTTGTCAAAAAAAAATTGTAACCCGGCTATTTTAGAGCTCCATGGTGTTCTTCTTAACAGAATAAGAACATTTTTACTCTATTTTCTATTGTGGG BLAST
Tissuepods
Gene nameLI_gene_161745; 
Additional informationdetails; 

Expression of Ll_transcript_339312

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_339312
BlastpDExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 68.11% of identity
BlastxDExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 68.13% of identity
Eggnoghelicase(COG4581)
KeggLink to kegg annotations (AT1G70070)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445516.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;