Ll_transcript_339313

Id TrinityTRINITY_DN48521_c4_g1_i3
Name TranscriptLl_transcript_339313
SequenceGGATGATATTCATACACTTATTTTGGTATATGGTTACAGCTTACCAAATATCTGGTCTATGTTAGTGCCGGTGATTGAGCAAATATTGCTGTGTGGTTGT GGTAGTAATGGTCACCTGATCTCTGCTGATAGTTGTACCATGAAATTTTCTCTTGAATAATCGTGTCAGAAAACAATATACCGTTAGATTTATAAATTAA TTCATGCATGTTCTCCTTACTACCCATGCTTTTGGGACAGTTGGTTCATGACATTGTATTGAAGTCTTTGTGACGAAGTGATCTAGAGTTCTGTCCATGT TTCAAGCCAAAAAGCCCTGTTGTATGAGGGGGGTGTTAAATTAAATACCATTCATGTGCCTTCATCCAAAACCTTAAATTTTTTGGGATAGTTGGATTGT GAAAATACTAATGGTTATGGTAGTGGGTGCTGCAGAGGCTGTGATGGCTTTGGTGGAAAAATGGATGCTGGTGATGGTGATTATATGATTGTACTGATTT ACATATTTTCGTTAAATAATAAGAGAATGAGGATCGAATAGAATAACTGAACTATATTCTGTGGAACAAGTGTTTTTTCCAAAAGAAAATTTAACGCCAT TGTAATTCTGTTATAATGCATGTAGAATAAGCTACTACCTGTTATTTACTTATTTTTATTTAAATAATTTAATCAACTAAATATTCACTATTATCAAAAG AAGTGAGAATCTCCTTCCACTTTTGATGATAATCGTATCATCCTTGCCTTTCAGCCTAATCCGTTTAGCACGTAATCTGTAGTCCGATCGTCTTACATAT TCCAGCATATGTATTCCAGCAGTTGGTAAGTAGAGCGTTGGCTAGGCGATTCCTTATATACGATAGCATCACGCCTTTCACCAAGCCGACCCTCAATGTG GATGAAGCTGCTTATTTTGCGTTGACTTCCGTCCGATGATGTGTATATCAACGTAGAAAAGATTTAGTGAAATTTAGATCTACCTTATTTTATTAGTAAC TCAAATAAAAGTGGAAACTCAGTTTTTTCCCTTTATTCAAAGCAGGAAGCTGTCACTCAATTATTTACAACTTCAAGCTGCAGGAGCTAAACAATACAAG GATGATGGGCCTAGAAAAAGGAATTCACGGAGACGAGGAACTCACACAAGCTATGATAGTGATGGTAGCATGTTTGAGCAACGTTCTCTTTCAAAGAATA ACATAAATGCAATTCGTCGTTCCCAAGTTCCTCAAGTAGTTGATACGTTATGGCATCTTCAGTCTAGGGATATGCTGCCAGCTGTGTGGTTTATTTTTAG CAGAAAGGGTTGTGATGCAGCTGTGCAATACCTTGAAGATTGCAGACTATTAGACGATTGTGAAACAAGTGAGGTTGAGCTAGCCTTGAAGAGGTTCCGC ATTCAGTATCCTGACGCTGTCAGAGAAACAGCTGTGAGAGGACTTCTGCAAGGGGTTGCTGCACATCATGCTGGTTGCCTACCTTTGTGGAAGGCATTCA TAGAAGAACTATTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACAGAAACCTTGGCTGCTGGAATCAATATGCCTGCTAGAACAGCTGTCATTTCGTC ACTTAGCAAAAGAAGTGACAGCGGACATGTCTATTTAAGCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGAGGCATTGATGAGCGTGGT CATGTAGTCCTCATCCAAACACCTAATGATGGTGCTGAGGAGGGTTGCAAGGTCTTGTTTGCTGGACTTGAGCCTTTAGTGTCCCAGTTTACTGCCTCAT ATGGAATGGTATTGAATCTTCTTTCTGGTGTAAAAGCCATTCGGTCAAATGAACCAGATGAAGTGAGACCTTCATCAGGAAGAACTTTAGAAGAAGCTAG GAAGTTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAACGTTATGCTGGCTGCCAAGGAAGAAATTAAAAAAATTAAGAAAGAAATTGAATTGCTG ATGTCAGAAATCACTGACGAAGCCATTGATAGAAAAAGCAGGAAGGCTTTATCACAGTGGGAATACAATGAGATCACGGAGTTACAGGAAAATTTAAGGG CAGAAAAACGTGTTCGGAGTGAATTGCGGAAACAGATGGAAGCAAAGAGAATTTCTGCCCTGAAACCTATACTGGAAGACCCTGAAAGGGAACATCTACC ATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTTCAACATTCAATTCCTGCAGCATATTTGGGGAAGGTTGACTCCCTAAATGCTTCAAAACTCAAG ATCATGATTTCTTCAGATGATTCTTTTGCGTTAAATTTTTTAGATGAAGAGCCAACAGGTGTTACTGATTCTTCATTAAATAAAAATCTTGAACTATCAT ATCATGTGGCTCTTGGTTCAGATAACTCCTGGTATCTATTTACAGAAAACTGGATTAAAGCAGTATATGGGACAGGCTTTCCTAATGTTCCATTGGCTCA AGGGGATGCTCTACCTCGAGAAATTATGAGTACTCTCCTTGATAAGGAGGAAATGAAGTGGGATAAGGTTGCTCAATCCGAACATGGTGGTTTATGGTTC GTGGATGGATCTCTAGAAACATGGTCTTGGAGTTTGAATGTTCCTGTTTTGAGTAGCTTATCTGAAAATGATGAGCTACTTTTAAAGTCTCAAGTCTACC AAGATGCCGTTGAACTTTACAAGAACCAAAGAACTAAAGTTGCACGCTTGAAGAAAAAGGTATCCCGTACTGGAGGGTACAAAGAATATAACAAAATCAT AGACGCTGTCAAGTTTACTGAGGAGAAAATCAAACGGCTGAAGACTAGATCAAAGCGCTTGTCTAATCGTATAGAACAAATTGAACCCGCAGGATGGAAA GAGTTTATGCATGTTAGCAATGTCATACATGAAACCAGAGCTTTAGATATTAATACACATGCCATCTTTCCACTTGGCCAAACCGCGGCTGCAATTCGAG GAGAAAATGAGCTTTGGCTTGCAATGGTTCTTCGCAATAAAAGTTTACTGGAACTAAAACCTGCACAACTTGCTGCAGTTTGTGCAAGTTTAGTGTCGGA GGGTATCAAAGTCCGACCTTGGAAAAACAACAGTTATATTTACGAGCCTTCTGCAACTGTAGTCAATTTCATAAGGTTGTTGGATGAGCAAAGAAAGGTC CTGATGTCAATTCAGGATAAACATGATGTAACAATATCTTGCTGTTTGGATAGCCAATTTTGTGGCATGGTTGAAGCCTGGGCTTCTGGTTTGACATGGA GAGAAATAATGATGGATTGTGCTATGGATGATGGTGATCTAGCTCGCCTCCTTCGTAGGACCATTGACCTTTTAGCCCAGATTCCGAAATTGACAGATAT TGATCCTTTGTTGCAGCGCAATGCAAAAGTTGCATATGATTTCATGGATCGGCCTCCAATAAGTGAGCTTGCTGGGTAATAGTAGTGTCTTTGTTCTCCT GTCCTGTGCTCCATTTGTAAATATTATTGTTGTATGATTAATTTCCCTAAATTATTTTCTTCTTCACAAAACCCACTTTTCAGTTAACTTAATTGTTTTT ATTATTTTGATCTCTCCTCTTCTTCTTTTTTGCGCATTTTGGTATGTTAACGCAATTTCTGTTAGTGTATTAGTCACTCTTGTCAAAAAAAAATTGTAAC CCGGCTATTTTAGAGCTCCATGGTGTTCTTCTTAACAGAATAAGAACATTTTTACTCTATTTTCTATTGTGGG BLAST
Tissuepods
Gene nameLI_gene_161745; 
Additional informationdetails; 

Expression of Ll_transcript_339313

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_339313
BlastpDExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 68.37% of identity
BlastxDExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 67.12% of identity
Eggnoghelicase(COG4581)
KeggLink to kegg annotations (AT1G70070)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445516.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;